Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col28a1Q2UY11 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm12149-201ENSMUST00000117511 654 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm13439-201ENSMUST00000117541 409 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm9043-201ENSMUST00000119677 314 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm11982-201ENSMUST00000121480 314 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm12872-201ENSMUST00000121835 320 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm14804-201ENSMUST00000122322 508 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm12226-201ENSMUST00000144172 876 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm26001-201ENSMUST00000157989 103 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm26171-201ENSMUST00000158422 131 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm24499-201ENSMUST00000158446 104 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm17153-201ENSMUST00000171314 490 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm27535-201ENSMUST00000183814 157 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm44858-201ENSMUST00000207360 154 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm45105-201ENSMUST00000207824 397 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Gm6240-201ENSMUST00000208014 473 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Snord68-201ENSMUST00000082516 86 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col28a1Q2UY11 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
Col28a1Q2UY11 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.46□□□□□ -1.85
Col28a1Q2UY11 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Col28a1Q2UY11 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm14355-201ENSMUST00000117352 264 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm13510-201ENSMUST00000118659 429 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm12806-201ENSMUST00000119384 268 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm13406-201ENSMUST00000121991 256 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm14333-201ENSMUST00000130484 264 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm25436-201ENSMUST00000158275 145 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm25438-201ENSMUST00000158281 110 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm24415-201ENSMUST00000180218 107 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm27392-201ENSMUST00000185041 101 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm43440-201ENSMUST00000201957 729 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm19252-201ENSMUST00000204705 305 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm6462-201ENSMUST00000081488 304 ntBASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col28a1Q2UY11 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm25565-201ENSMUST00000104605 105 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm12235-201ENSMUST00000118596 170 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm11600-201ENSMUST00000119592 240 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm14591-201ENSMUST00000120407 518 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm14559-201ENSMUST00000121745 496 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm22531-201ENSMUST00000158819 140 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm6374-201ENSMUST00000159051 788 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm21726-201ENSMUST00000179654 392 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm19637-201ENSMUST00000185933 579 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm19641-201ENSMUST00000188432 417 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm43975-201ENSMUST00000203023 481 ntBASIC3.45□□□□□ -1.86
Col28a1Q2UY11 Gm45245-201ENSMUST00000210082 376 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms