Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm12954-201ENSMUST00000118610 611 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm14887-201ENSMUST00000119522 663 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm15030-201ENSMUST00000119804 484 ntBASIC3.23□□□□□ -1.89
NcanP55066 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm24393-201ENSMUST00000158135 97 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.23□□□□□ -1.89
NcanP55066 Gm25451-201ENSMUST00000177832 121 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm26585-201ENSMUST00000180890 630 ntBASIC3.23□□□□□ -1.89
NcanP55066 Mir8119-201ENSMUST00000183371 129 ntBASIC3.23□□□□□ -1.89
NcanP55066 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.23□□□□□ -1.89
NcanP55066 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.23□□□□□ -1.89
NcanP55066 Gm43198-201ENSMUST00000200927 326 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NcanP55066 Gm44016-201ENSMUST00000203463 164 ntBASIC3.23□□□□□ -1.89
NcanP55066 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC3.23□□□□□ -1.89
NcanP55066 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.23□□□□□ -1.89
NcanP55066 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NcanP55066 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.23□□□□□ -1.89
NcanP55066 AC164297.5-201ENSMUST00000224365 198 ntBASIC3.23□□□□□ -1.89
NcanP55066 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NcanP55066 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
NcanP55066 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
NcanP55066 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
NcanP55066 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
NcanP55066 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NcanP55066 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.22□□□□□ -1.89
NcanP55066 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NcanP55066 Gm13082-201ENSMUST00000118877 561 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm11357-201ENSMUST00000119758 954 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm11876-201ENSMUST00000120002 269 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm25052-201ENSMUST00000122661 158 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.22□□□□□ -1.89
NcanP55066 Gm24075-201ENSMUST00000158175 72 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm24666-201ENSMUST00000158937 167 ntBASIC3.22□□□□□ -1.89
NcanP55066 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.22□□□□□ -1.89
NcanP55066 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm9593-201ENSMUST00000166034 469 ntBASIC3.22□□□□□ -1.89
NcanP55066 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm23289-201ENSMUST00000175615 108 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NcanP55066 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.22□□□□□ -1.89
NcanP55066 Mir7013-201ENSMUST00000183540 72 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm27898-201ENSMUST00000183987 80 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.22□□□□□ -1.89
NcanP55066 Gm37290-201ENSMUST00000195775 339 ntBASIC3.22□□□□□ -1.89
NcanP55066 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm43550-201ENSMUST00000200597 303 ntBASIC3.22□□□□□ -1.89
NcanP55066 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.22□□□□□ -1.89
NcanP55066 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.22□□□□□ -1.89
NcanP55066 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.22□□□□□ -1.89
NcanP55066 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.22□□□□□ -1.89
NcanP55066 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.22□□□□□ -1.89
NcanP55066 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.22□□□□□ -1.89
NcanP55066 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.22□□□□□ -1.89
NcanP55066 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NcanP55066 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NcanP55066 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.22□□□□□ -1.89
NcanP55066 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
NcanP55066 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.22□□□□□ -1.89
NcanP55066 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.21□□□□□ -1.89
NcanP55066 Gm13880-201ENSMUST00000118421 474 ntBASIC3.21□□□□□ -1.9
NcanP55066 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.21□□□□□ -1.9
NcanP55066 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.21□□□□□ -1.9
NcanP55066 Gm9225-201ENSMUST00000121921 836 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm14768-201ENSMUST00000122126 678 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm23118-201ENSMUST00000122657 187 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.21□□□□□ -1.9
NcanP55066 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
NcanP55066 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NcanP55066 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NcanP55066 Gm26348-201ENSMUST00000157528 240 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm22733-201ENSMUST00000158094 91 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm23352-201ENSMUST00000158428 64 ntBASIC3.21□□□□□ -1.9
NcanP55066 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.21□□□□□ -1.9
NcanP55066 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.21□□□□□ -1.9
NcanP55066 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.21□□□□□ -1.9
NcanP55066 Mir7j-201ENSMUST00000184427 122 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.21□□□□□ -1.9
NcanP55066 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NcanP55066 Gm38329-201ENSMUST00000193473 427 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm37732-201ENSMUST00000194377 316 ntBASIC3.21□□□□□ -1.9
NcanP55066 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm42465-201ENSMUST00000197036 492 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm43114-201ENSMUST00000198298 343 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.21□□□□□ -1.9
NcanP55066 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.21□□□□□ -1.9
NcanP55066 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC3.21□□□□□ -1.9
NcanP55066 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NcanP55066 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.21□□□□□ -1.9
NcanP55066 AL772265.1-201ENSMUST00000214379 305 ntBASIC3.21□□□□□ -1.9
NcanP55066 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.21□□□□□ -1.9
NcanP55066 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
NcanP55066 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NcanP55066 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.21□□□□□ -1.9
NcanP55066 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NcanP55066 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NcanP55066 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NcanP55066 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 127.2 ms