Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm14020-201ENSMUST00000118165 662 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm11784-201ENSMUST00000118568 474 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.39□□□□□ -1.87
Traf1P39428 Gm22849-201ENSMUST00000157713 307 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm22961-201ENSMUST00000157964 106 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.39□□□□□ -1.87
Traf1P39428 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Mir5123-201ENSMUST00000177794 83 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.39□□□□□ -1.87
Traf1P39428 Mir6916-201ENSMUST00000184514 63 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm36966-201ENSMUST00000192217 413 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm43114-201ENSMUST00000198298 343 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm42665-201ENSMUST00000202100 586 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.39□□□□□ -1.87
Traf1P39428 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.39□□□□□ -1.87
Traf1P39428 AC162931.1-201ENSMUST00000214184 267 ntBASIC3.39□□□□□ -1.87
Traf1P39428 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.39□□□□□ -1.87
Traf1P39428 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Traf1P39428 Gm23738-201ENSMUST00000082828 171 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Mir19a-201ENSMUST00000083482 82 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Traf1P39428 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.39□□□□□ -1.87
Traf1P39428 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Traf1P39428 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Traf1P39428 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Traf1P39428 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Traf1P39428 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Traf1P39428 Gm11357-201ENSMUST00000119758 954 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Gm14877-201ENSMUST00000119803 478 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.38□□□□□ -1.87
Traf1P39428 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.38□□□□□ -1.87
Traf1P39428 Mir3964-201ENSMUST00000174898 74 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.38□□□□□ -1.87
Traf1P39428 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.38□□□□□ -1.87
Traf1P39428 Gm29553-201ENSMUST00000189692 279 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Gm37081-201ENSMUST00000192034 196 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Gm38154-201ENSMUST00000195444 340 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Gm42818-201ENSMUST00000198869 987 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Gm44295-201ENSMUST00000203805 437 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.38□□□□□ -1.87
Traf1P39428 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.38□□□□□ -1.87
Traf1P39428 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.38□□□□□ -1.87
Traf1P39428 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.38□□□□□ -1.87
Traf1P39428 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.38□□□□□ -1.87
Traf1P39428 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Traf1P39428 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Traf1P39428 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Traf1P39428 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Traf1P39428 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.37□□□□□ -1.87
Traf1P39428 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Traf1P39428 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Traf1P39428 Gm25088-201ENSMUST00000101803 79 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
Traf1P39428 Mir582-201ENSMUST00000103758 81 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm12787-201ENSMUST00000119234 396 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm5937-201ENSMUST00000119715 643 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm14159-201ENSMUST00000119832 451 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm12044-201ENSMUST00000120335 213 ntBASIC3.37□□□□□ -1.87
Traf1P39428 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.37□□□□□ -1.87
Traf1P39428 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm18417-201ENSMUST00000176564 648 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm24137-201ENSMUST00000180055 79 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm22391-201ENSMUST00000180356 79 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm27796-201ENSMUST00000183863 261 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm27869-201ENSMUST00000184327 122 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm27700-201ENSMUST00000185003 81 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.37□□□□□ -1.87
Traf1P39428 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.37□□□□□ -1.87
Traf1P39428 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.37□□□□□ -1.87
Traf1P39428 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Gm23645-201ENSMUST00000083228 108 ntBASIC3.37□□□□□ -1.87
Traf1P39428 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Traf1P39428 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Traf1P39428 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Traf1P39428 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Traf1P39428 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Traf1P39428 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.36□□□□□ -1.87
Traf1P39428 Gm22658-201ENSMUST00000104196 155 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm15659-201ENSMUST00000118881 341 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.36□□□□□ -1.87
Traf1P39428 Gm22560-201ENSMUST00000157332 120 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.36□□□□□ -1.87
Traf1P39428 Gm24086-201ENSMUST00000175171 98 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.36□□□□□ -1.87
Traf1P39428 Gm27532-201ENSMUST00000183726 113 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Mir6371-201ENSMUST00000184470 111 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm27505-201ENSMUST00000185071 110 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm7329-201ENSMUST00000185915 210 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm29640-201ENSMUST00000187972 278 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.36□□□□□ -1.87
Traf1P39428 Gm43521-201ENSMUST00000197838 255 ntBASIC3.36□□□□□ -1.87
Traf1P39428 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.36□□□□□ -1.87
Traf1P39428 Gm43107-201ENSMUST00000198729 255 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms