Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hcn1O88704 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.05□□□□□ -1.92
Hcn1O88704 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
Hcn1O88704 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hcn1O88704 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hcn1O88704 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hcn1O88704 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hcn1O88704 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hcn1O88704 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm14918-201ENSMUST00000118153 268 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm6274-201ENSMUST00000118173 797 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm11785-201ENSMUST00000120165 601 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm24532-201ENSMUST00000157951 286 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm23028-201ENSMUST00000158773 265 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hcn1O88704 Gm20698-201ENSMUST00000175657 233 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm24464-201ENSMUST00000179697 107 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm11395-201ENSMUST00000181011 499 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm28404-201ENSMUST00000190242 453 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hcn1O88704 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hcn1O88704 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.05□□□□□ -1.92
Hcn1O88704 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hcn1O88704 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hcn1O88704 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hcn1O88704 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hcn1O88704 Gm10237-201ENSMUST00000078393 273 ntBASIC3.05□□□□□ -1.92
Hcn1O88704 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hcn1O88704 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hcn1O88704 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.04□□□□□ -1.92
Hcn1O88704 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hcn1O88704 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Hcn1O88704 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hcn1O88704 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hcn1O88704 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hcn1O88704 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Hcn1O88704 Gm22497-201ENSMUST00000104499 131 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Hcn1O88704 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Gm14804-201ENSMUST00000122322 508 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 Gm24240-201ENSMUST00000157785 135 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 Gm26652-202ENSMUST00000181672 475 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Mir8106-201ENSMUST00000184520 139 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Gm19641-201ENSMUST00000188432 417 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Gm37869-201ENSMUST00000193385 595 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Gm44324-201ENSMUST00000198517 135 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.04□□□□□ -1.92
Hcn1O88704 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Hcn1O88704 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 AC112972.1-201ENSMUST00000227329 365 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Gm9765-201ENSMUST00000043170 321 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 Gm22974-201ENSMUST00000083301 103 ntBASIC3.04□□□□□ -1.92
Hcn1O88704 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Hcn1O88704 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Hcn1O88704 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hcn1O88704 Gm24118-201ENSMUST00000103972 126 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm15936-201ENSMUST00000118706 460 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm11582-201ENSMUST00000121041 236 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Hcn1O88704 Gm22563-201ENSMUST00000157333 269 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm22633-201ENSMUST00000179834 107 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm23144-201ENSMUST00000180226 107 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm27374-201ENSMUST00000183660 81 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.03□□□□□ -1.92
Hcn1O88704 Gm21673-201ENSMUST00000186640 436 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm21135-201ENSMUST00000189023 436 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm37771-201ENSMUST00000193121 265 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm18551-201ENSMUST00000195594 642 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm18113-201ENSMUST00000220630 303 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.03□□□□□ -1.92
Hcn1O88704 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm23136-201ENSMUST00000083425 99 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Gm25411-201ENSMUST00000083760 151 ntBASIC3.03□□□□□ -1.92
Hcn1O88704 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Hcn1O88704 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Hcn1O88704 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Hcn1O88704 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Hcn1O88704 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
Hcn1O88704 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.02□□□□□ -1.93
Hcn1O88704 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms