Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm38329-201ENSMUST00000193473 427 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Gm18341-201ENSMUST00000197538 622 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Cacna1bO55017 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
Cacna1bO55017 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Cacna1bO55017 Gm25416-201ENSMUST00000104221 107 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Gm14923-201ENSMUST00000118270 155 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Gm11843-201ENSMUST00000118984 425 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
Cacna1bO55017 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.54□□□□□ -2.16
Cacna1bO55017 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Cacna1bO55017 Gm23329-201ENSMUST00000157415 108 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC1.54□□□□□ -2.16
Cacna1bO55017 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Cacna1bO55017 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.54□□□□□ -2.16
Cacna1bO55017 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Cacna1bO55017 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
Cacna1bO55017 AC116557.1-201ENSMUST00000219494 1521 ntBASIC1.53□□□□□ -2.16
Cacna1bO55017 Gm13424-201ENSMUST00000122301 354 ntBASIC1.53□□□□□ -2.16
Cacna1bO55017 Gm26278-201ENSMUST00000157098 132 ntBASIC1.53□□□□□ -2.16
Cacna1bO55017 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC1.53□□□□□ -2.16
Cacna1bO55017 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.53□□□□□ -2.16
Cacna1bO55017 Gm44548-201ENSMUST00000208929 192 ntBASIC1.53□□□□□ -2.16
Cacna1bO55017 AC116395.1-201ENSMUST00000225480 1143 ntBASIC1.53□□□□□ -2.16
Cacna1bO55017 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Cacna1bO55017 Gm22866-201ENSMUST00000083947 177 ntBASIC1.53□□□□□ -2.16
Cacna1bO55017 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.53□□□□□ -2.16
Cacna1bO55017 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Cacna1bO55017 Gm6215-201ENSMUST00000119297 1386 ntBASIC1.53□□□□□ -2.17
Cacna1bO55017 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.53□□□□□ -2.17
Cacna1bO55017 Gm22019-201ENSMUST00000104359 96 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm23234-201ENSMUST00000157304 134 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm23760-201ENSMUST00000158350 116 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm2855-201ENSMUST00000166765 456 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm20526-201ENSMUST00000173416 158 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm37431-201ENSMUST00000195102 111 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC1.52□□□□□ -2.17
Cacna1bO55017 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC1.52□□□□□ -2.17
Cacna1bO55017 AC124433.2-201ENSMUST00000223867 291 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Mir878-201ENSMUST00000104680 78 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm13614-201ENSMUST00000117306 503 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm24061-201ENSMUST00000157489 120 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Adgrg4-206ENSMUST00000168724 531 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm25958-201ENSMUST00000175114 71 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm28802-201ENSMUST00000188624 944 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm37037-201ENSMUST00000194475 424 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm43723-201ENSMUST00000196886 189 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm45063-201ENSMUST00000203726 472 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC1.52□□□□□ -2.17
Cacna1bO55017 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Cacna1bO55017 Gm24144-201ENSMUST00000082632 111 ntBASIC1.52□□□□□ -2.17
Cacna1bO55017 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cacna1bO55017 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cacna1bO55017 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm14771-201ENSMUST00000118249 203 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm15508-201ENSMUST00000160330 325 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm3102-201ENSMUST00000164236 489 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm42438-201ENSMUST00000197832 974 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm25810-201ENSMUST00000082752 108 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm11577-201ENSMUST00000118030 737 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm27025-201ENSMUST00000182392 942 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm37817-201ENSMUST00000195276 434 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Mir7232-201ENSMUST00000197929 74 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.51□□□□□ -2.17
Cacna1bO55017 AC153662.1-201ENSMUST00000222220 270 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 AC173481.1-201ENSMUST00000223351 270 ntBASIC1.51□□□□□ -2.17
Cacna1bO55017 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms