Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm37791-201ENSMUST00000195081 286 ntBASIC5.94□□□□□ -1.46
Trim35Q8C006 Gm2614-201ENSMUST00000223227 403 ntBASIC5.94□□□□□ -1.46
Trim35Q8C006 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim35Q8C006 Gm14416-201ENSMUST00000118630 2308 ntBASIC5.94□□□□□ -1.46
Trim35Q8C006 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim35Q8C006 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.94□□□□□ -1.46
Trim35Q8C006 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim35Q8C006 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim35Q8C006 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim35Q8C006 Mir547-201ENSMUST00000102051 78 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm25917-201ENSMUST00000104267 130 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm22343-201ENSMUST00000122648 286 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm24716-201ENSMUST00000157524 104 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm24905-201ENSMUST00000158129 104 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm38332-201ENSMUST00000194189 147 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm20056-201ENSMUST00000194813 519 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm25515-201ENSMUST00000083858 157 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 AC117226.1-201ENSMUST00000221635 3737 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.93□□□□□ -1.46
Trim35Q8C006 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim35Q8C006 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trim35Q8C006 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim35Q8C006 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Trim35Q8C006 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim35Q8C006 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
Trim35Q8C006 Gm22499-201ENSMUST00000104501 135 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 Gm12351-201ENSMUST00000118727 292 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 Gm23995-201ENSMUST00000158060 129 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim35Q8C006 Gm5318-201ENSMUST00000205249 406 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.92□□□□□ -1.46
Trim35Q8C006 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trim35Q8C006 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.92□□□□□ -1.46
Trim35Q8C006 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim35Q8C006 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Trim35Q8C006 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Trim35Q8C006 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trim35Q8C006 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim35Q8C006 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm13132-201ENSMUST00000121194 472 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm24081-201ENSMUST00000175177 125 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm23415-201ENSMUST00000175519 83 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm27460-201ENSMUST00000184213 100 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm43501-201ENSMUST00000202513 107 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm44239-201ENSMUST00000204228 271 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.91□□□□□ -1.46
Trim35Q8C006 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim35Q8C006 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim35Q8C006 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim35Q8C006 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm44682-201ENSMUST00000208501 2614 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim35Q8C006 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim35Q8C006 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim35Q8C006 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Trim35Q8C006 Gm7452-202ENSMUST00000202891 3039 ntBASIC5.91□□□□□ -1.46
Trim35Q8C006 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim35Q8C006 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim35Q8C006 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim35Q8C006 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim35Q8C006 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Trim35Q8C006 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim35Q8C006 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim35Q8C006 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Trim35Q8C006 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim35Q8C006 Gm12244-201ENSMUST00000119500 291 ntBASIC5.9□□□□□ -1.46
Trim35Q8C006 Gm22451-201ENSMUST00000122803 151 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms