Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm43415-201ENSMUST00000201934 750 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm7726-201ENSMUST00000206241 231 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm18696-201ENSMUST00000220103 274 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 AC170600.1-201ENSMUST00000228763 277 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim28Q62318 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.51□□□□□ -1.69
Trim28Q62318 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim28Q62318 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim28Q62318 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Trim28Q62318 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim28Q62318 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim28Q62318 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim28Q62318 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm23609-201ENSMUST00000104542 127 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm12765-201ENSMUST00000117273 615 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm15167-201ENSMUST00000121997 187 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm25967-201ENSMUST00000157168 147 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm22597-201ENSMUST00000157602 80 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm24289-201ENSMUST00000157629 135 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm24857-201ENSMUST00000158061 310 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm15900-201ENSMUST00000161584 342 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm26988-201ENSMUST00000183296 945 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm28030-201ENSMUST00000184987 138 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim28Q62318 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim28Q62318 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim28Q62318 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.5□□□□□ -1.69
Trim28Q62318 Gm43932-201ENSMUST00000204499 52 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim28Q62318 Gm45048-201ENSMUST00000207058 429 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm39147-201ENSMUST00000211376 465 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm18441-201ENSMUST00000223539 617 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim28Q62318 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim28Q62318 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim28Q62318 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim28Q62318 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
Trim28Q62318 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim28Q62318 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.5□□□□□ -1.69
Trim28Q62318 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Trim28Q62318 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim28Q62318 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim28Q62318 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim28Q62318 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim28Q62318 AC102369.2-201ENSMUST00000219725 1679 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm22497-201ENSMUST00000104499 131 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm14359-201ENSMUST00000118883 424 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm15177-201ENSMUST00000120491 577 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm14577-201ENSMUST00000121134 256 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm5123-201ENSMUST00000121905 837 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm5755-201ENSMUST00000152394 837 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm8292-201ENSMUST00000162574 396 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Mir5098-201ENSMUST00000175320 82 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim28Q62318 Gm22851-201ENSMUST00000178741 94 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim28Q62318 Gm45023-201ENSMUST00000207951 379 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.49□□□□□ -1.69
Trim28Q62318 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm9765-201ENSMUST00000043170 321 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim28Q62318 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim28Q62318 Gm26225-201ENSMUST00000082508 135 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm25699-201ENSMUST00000082896 167 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm4017-201ENSMUST00000084813 338 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Gm10222-201ENSMUST00000088336 294 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Trim28Q62318 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.49□□□□□ -1.69
Trim28Q62318 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim28Q62318 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim28Q62318 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim28Q62318 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim28Q62318 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim28Q62318 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
Trim28Q62318 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim28Q62318 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Trim28Q62318 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.48□□□□□ -1.69
Trim28Q62318 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim28Q62318 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim28Q62318 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim28Q62318 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 156.6 ms