Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm9059-201ENSMUST00000118319 183 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm22479-201ENSMUST00000122566 81 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm25339-201ENSMUST00000157458 232 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Mir3965-201ENSMUST00000175570 69 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm23191-201ENSMUST00000179147 107 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm23003-201ENSMUST00000179948 107 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm21673-201ENSMUST00000186640 436 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm29064-201ENSMUST00000187014 813 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm21135-201ENSMUST00000189023 436 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm37085-201ENSMUST00000193780 196 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm18384-201ENSMUST00000195974 808 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm43521-201ENSMUST00000197838 255 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm43107-201ENSMUST00000198729 255 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm5322-201ENSMUST00000206142 699 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 AC107757.3-201ENSMUST00000226312 535 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Rnf180Q3U827 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Rnf180Q3U827 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Rnf180Q3U827 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Rnf180Q3U827 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Rnf180Q3U827 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Rnf180Q3U827 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm22021-201ENSMUST00000104353 107 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm14622-201ENSMUST00000117117 468 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm12255-201ENSMUST00000117184 284 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm22601-201ENSMUST00000157595 250 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm25982-201ENSMUST00000157920 101 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Mir3058-201ENSMUST00000175126 91 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm29229-201ENSMUST00000188874 323 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm44376-201ENSMUST00000197570 128 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm5023-201ENSMUST00000217442 587 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 CT030187.1-201ENSMUST00000220605 252 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 AC113031.5-201ENSMUST00000227116 606 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Gm26107-201ENSMUST00000083972 107 ntBASIC4.47□□□□□ -1.69
Rnf180Q3U827 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Rnf180Q3U827 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
Rnf180Q3U827 Gm15975-201ENSMUST00000122385 1402 ntBASIC4.46□□□□□ -1.69
Rnf180Q3U827 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.46□□□□□ -1.69
Rnf180Q3U827 Gm13085-201ENSMUST00000118356 171 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm13511-201ENSMUST00000121167 363 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm24244-201ENSMUST00000157317 130 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm24958-201ENSMUST00000158009 97 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm17119-201ENSMUST00000163943 280 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm7925-201ENSMUST00000166690 401 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Rnf180Q3U827 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm44060-201ENSMUST00000204440 410 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm44399-201ENSMUST00000205043 226 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm45387-201ENSMUST00000209792 632 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm45327-201ENSMUST00000211612 565 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm26263-201ENSMUST00000083281 164 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.46□□□□□ -1.7
Rnf180Q3U827 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Rnf180Q3U827 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
Rnf180Q3U827 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm6762-201ENSMUST00000121769 289 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm24385-201ENSMUST00000122694 350 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm24546-201ENSMUST00000158652 102 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm16038-201ENSMUST00000159317 193 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm17148-201ENSMUST00000164702 249 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.45□□□□□ -1.7
Rnf180Q3U827 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.45□□□□□ -1.7
Rnf180Q3U827 Gm20399-201ENSMUST00000174652 132 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms