Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm11584-201ENSMUST00000120636 325 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Gm14694-201ENSMUST00000121856 282 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Gm7840-201ENSMUST00000122086 533 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Gm22027-201ENSMUST00000122737 127 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Gm23640-201ENSMUST00000157860 104 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Gm22315-201ENSMUST00000158010 143 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Mir6344-201ENSMUST00000183462 104 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Hoxd9P28357 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hoxd9P28357 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hoxd9P28357 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hoxd9P28357 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd9P28357 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hoxd9P28357 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.52□□□□□ -1.69
Hoxd9P28357 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.51□□□□□ -1.69
Hoxd9P28357 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hoxd9P28357 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hoxd9P28357 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hoxd9P28357 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm11325-201ENSMUST00000119967 469 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm13867-201ENSMUST00000120844 395 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm11645-201ENSMUST00000121589 649 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm24481-201ENSMUST00000157210 102 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm17187-201ENSMUST00000164622 410 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm25121-201ENSMUST00000179846 79 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm30341-201ENSMUST00000194363 289 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm45013-201ENSMUST00000206883 178 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Hoxd9P28357 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.51□□□□□ -1.69
Hoxd9P28357 Gm23517-201ENSMUST00000082830 192 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hoxd9P28357 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
Hoxd9P28357 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hoxd9P28357 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.51□□□□□ -1.69
Hoxd9P28357 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Hoxd9P28357 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hoxd9P28357 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Hoxd9P28357 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hoxd9P28357 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd9P28357 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd9P28357 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm12062-201ENSMUST00000117533 259 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm11631-201ENSMUST00000119220 156 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm11931-201ENSMUST00000121630 447 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm17186-201ENSMUST00000171742 456 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm19901-201ENSMUST00000192191 495 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm20203-201ENSMUST00000192352 332 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm37601-201ENSMUST00000194922 394 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm44402-201ENSMUST00000203677 238 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm44010-201ENSMUST00000204432 331 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm25147-201ENSMUST00000083030 105 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd9P28357 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Hoxd9P28357 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Hoxd9P28357 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.5□□□□□ -1.69
Hoxd9P28357 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd9P28357 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hoxd9P28357 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd9P28357 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
Hoxd9P28357 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 Gm14977-201ENSMUST00000121626 812 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd9P28357 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd9P28357 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd9P28357 Gm28552-201ENSMUST00000190725 388 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 Gm37636-201ENSMUST00000193583 359 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.49□□□□□ -1.69
Hoxd9P28357 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.49□□□□□ -1.69
Hoxd9P28357 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Hoxd9P28357 Gm22826-201ENSMUST00000083774 165 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 Gm23039-201ENSMUST00000083870 161 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.49□□□□□ -1.69
Hoxd9P28357 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Hoxd9P28357 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms