Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm14930-201ENSMUST00000118864 652 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Snrpert-201ENSMUST00000121967 279 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm29603-201ENSMUST00000186792 334 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm30341-201ENSMUST00000194363 289 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm43550-201ENSMUST00000200597 303 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Col6a5A6H584 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Col6a5A6H584 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Col6a5A6H584 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
Col6a5A6H584 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Col6a5A6H584 Mir669f-201ENSMUST00000103850 121 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Col6a5A6H584 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm24690-201ENSMUST00000157759 97 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm29263-201ENSMUST00000188718 463 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm28384-201ENSMUST00000189079 463 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm19193-201ENSMUST00000190263 590 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm14558-201ENSMUST00000117458 381 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm25715-201ENSMUST00000158627 125 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm25838-201ENSMUST00000158920 120 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm23144-201ENSMUST00000180226 107 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.19□□□□□ -2.22
Col6a5A6H584 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 AC140254.1-201ENSMUST00000220063 331 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Gm26126-201ENSMUST00000083188 164 ntBASIC1.19□□□□□ -2.22
Col6a5A6H584 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC1.18□□□□□ -2.22
Col6a5A6H584 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col6a5A6H584 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a5A6H584 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm11862-201ENSMUST00000119678 659 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm13246-201ENSMUST00000120994 315 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm37616-201ENSMUST00000193974 322 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm42834-201ENSMUST00000196845 256 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC1.18□□□□□ -2.22
Col6a5A6H584 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.18□□□□□ -2.22
Col6a5A6H584 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC1.18□□□□□ -2.22
Col6a5A6H584 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a5A6H584 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm25992-201ENSMUST00000102437 109 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm11876-201ENSMUST00000120002 269 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm23435-201ENSMUST00000157183 156 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm23278-201ENSMUST00000157911 143 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm25768-201ENSMUST00000158570 98 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm2855-201ENSMUST00000166765 456 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm24369-201ENSMUST00000175387 96 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm26960-201ENSMUST00000182263 412 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a5A6H584 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 AC141884.1-201ENSMUST00000226327 636 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.18□□□□□ -2.22
Col6a5A6H584 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
Col6a5A6H584 Gm37063-201ENSMUST00000194678 3520 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.17□□□□□ -2.22
Col6a5A6H584 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Col6a5A6H584 Mir6405-201ENSMUST00000184584 124 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Mir6540-201ENSMUST00000184886 108 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Olfr1055-202ENSMUST00000188023 939 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Gm44962-201ENSMUST00000206460 279 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Col6a5A6H584 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col6a5A6H584 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col6a5A6H584 Gm24313-201ENSMUST00000082561 133 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Gm25166-201ENSMUST00000158909 111 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Mir7232-201ENSMUST00000197929 74 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Gm44989-201ENSMUST00000204749 217 ntBASIC1.17□□□□□ -2.22
Col6a5A6H584 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
Col6a5A6H584 Gm12393-201ENSMUST00000117084 848 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm22665-201ENSMUST00000158720 275 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm26285-201ENSMUST00000177923 107 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm42623-201ENSMUST00000197225 379 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm12372-201ENSMUST00000121654 768 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm3102-201ENSMUST00000164236 489 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm25633-201ENSMUST00000178565 107 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Mir6346-201ENSMUST00000183982 81 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm37576-201ENSMUST00000194228 372 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm6590-201ENSMUST00000203343 687 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 Gm6012-201ENSMUST00000210821 730 ntBASIC1.16□□□□□ -2.22
Col6a5A6H584 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms