Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 Gm25404-201ENSMUST00000082970 107 ntBASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 Gm42448-201ENSMUST00000197122 2644 ntBASIC2.7□□□□□ -1.98
Scn5aQ9JJV9 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm13046-201ENSMUST00000117391 501 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm12954-201ENSMUST00000118610 611 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm23463-201ENSMUST00000122468 99 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm16588-201ENSMUST00000162889 355 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm20415-201ENSMUST00000172877 423 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Snord53-201ENSMUST00000175146 78 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Mir3106-201ENSMUST00000175401 82 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Mir6386-201ENSMUST00000183558 104 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm28384-201ENSMUST00000189079 463 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm43393-201ENSMUST00000200147 194 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm18729-201ENSMUST00000217230 621 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Mir127-201ENSMUST00000093568 70 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm22073-201ENSMUST00000122668 189 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm23167-201ENSMUST00000157155 103 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm16584-201ENSMUST00000159267 189 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm20915-201ENSMUST00000191575 663 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm42509-201ENSMUST00000197390 781 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm43198-201ENSMUST00000200927 326 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm44718-201ENSMUST00000206886 359 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm18000-201ENSMUST00000212153 800 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm23939-201ENSMUST00000082880 133 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm25582-201ENSMUST00000083412 110 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.69□□□□□ -1.98
Scn5aQ9JJV9 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm23472-201ENSMUST00000101806 191 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm11367-201ENSMUST00000117802 120 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm22330-201ENSMUST00000158068 115 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm24736-201ENSMUST00000158862 130 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm24497-201ENSMUST00000177868 191 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm25939-201ENSMUST00000179876 191 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm7909-201ENSMUST00000182688 614 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm37987-201ENSMUST00000194999 825 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm23444-201ENSMUST00000082922 191 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm14877-201ENSMUST00000119803 478 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm11414-201ENSMUST00000121795 263 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm22960-201ENSMUST00000122517 104 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm22793-201ENSMUST00000157227 330 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm22776-201ENSMUST00000178634 94 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm23767-201ENSMUST00000179278 94 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm26622-201ENSMUST00000180520 298 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Mir7009-201ENSMUST00000184519 64 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm37845-201ENSMUST00000194977 355 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Gm24254-201ENSMUST00000083702 104 ntBASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
Scn5aQ9JJV9 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.67□□□□□ -1.98
Scn5aQ9JJV9 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.67□□□□□ -1.98
Scn5aQ9JJV9 Gm15878-201ENSMUST00000127561 306 ntBASIC2.67□□□□□ -1.98
Scn5aQ9JJV9 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.67□□□□□ -1.98
Scn5aQ9JJV9 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.67□□□□□ -1.98
Scn5aQ9JJV9 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.67□□□□□ -1.98
Scn5aQ9JJV9 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms