Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim42Q9D2H5 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm26147-201ENSMUST00000104479 114 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm23178-201ENSMUST00000116782 95 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm7189-201ENSMUST00000119811 429 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm22968-201ENSMUST00000157955 118 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm22725-201ENSMUST00000158092 110 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm25015-201ENSMUST00000158400 128 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm24876-201ENSMUST00000158780 92 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm16303-201ENSMUST00000161498 390 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm25450-201ENSMUST00000179144 107 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm37763-201ENSMUST00000193445 120 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm43250-201ENSMUST00000196536 273 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm18320-201ENSMUST00000211304 595 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm6796-201ENSMUST00000211919 243 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Mir449a-201ENSMUST00000083641 91 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm26163-201ENSMUST00000083792 178 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim42Q9D2H5 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm22784-201ENSMUST00000104088 132 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm25419-201ENSMUST00000104215 191 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm15206-201ENSMUST00000119143 454 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm11572-201ENSMUST00000119164 120 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm7609-204ENSMUST00000161424 461 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Mir669k-201ENSMUST00000177742 127 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm25673-201ENSMUST00000179957 127 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm28467-201ENSMUST00000190981 318 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm4045-201ENSMUST00000204076 310 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm45772-201ENSMUST00000212961 240 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Snord82-201ENSMUST00000082889 70 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Trim42Q9D2H5 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm24263-201ENSMUST00000104059 107 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm24230-201ENSMUST00000104313 129 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Snord19-201ENSMUST00000104609 76 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm24132-201ENSMUST00000104745 91 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Mir466j-201ENSMUST00000116876 122 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm11912-201ENSMUST00000117235 264 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm13714-201ENSMUST00000117313 221 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm14880-201ENSMUST00000117581 292 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm14562-201ENSMUST00000129885 543 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm5958-201ENSMUST00000147698 297 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm23743-201ENSMUST00000157389 274 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm23250-201ENSMUST00000157444 267 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm27510-201ENSMUST00000158214 64 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm22113-201ENSMUST00000158343 104 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm26291-201ENSMUST00000158889 137 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Mir6416-201ENSMUST00000183664 117 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Mir7653-201ENSMUST00000184358 61 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm27608-201ENSMUST00000184822 162 ntBASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Trim42Q9D2H5 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms