Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mir370-201ENSMUST00000083499 79 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm23851-201ENSMUST00000083831 103 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm7133-201ENSMUST00000187797 2039 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Mir551b-201ENSMUST00000102165 98 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm25097-201ENSMUST00000104042 145 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm13268-201ENSMUST00000117485 433 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm13439-201ENSMUST00000117541 409 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm14282-201ENSMUST00000119484 240 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm13717-201ENSMUST00000119868 365 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm11645-201ENSMUST00000121589 649 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm11931-201ENSMUST00000121630 447 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm13852-201ENSMUST00000122350 242 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm22613-201ENSMUST00000122679 292 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm26349-201ENSMUST00000157530 130 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm23592-201ENSMUST00000157859 117 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm24550-201ENSMUST00000158648 279 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm24737-201ENSMUST00000158861 100 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Mir5136-201ENSMUST00000175573 76 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm23047-201ENSMUST00000177661 94 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm25944-201ENSMUST00000178758 94 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm27428-201ENSMUST00000184289 110 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Mir6481-201ENSMUST00000184617 110 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm28058-201ENSMUST00000186421 264 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm28151-201ENSMUST00000189404 951 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm7449-201ENSMUST00000194393 663 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm42805-201ENSMUST00000196158 276 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm5551-201ENSMUST00000199720 690 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm7753-201ENSMUST00000221007 867 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm25202-201ENSMUST00000082838 191 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Gm38083-201ENSMUST00000194758 3498 ntBASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc9Q8VC31 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm13603-201ENSMUST00000119404 83 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm25294-201ENSMUST00000122791 104 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm14562-201ENSMUST00000129885 543 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm22842-201ENSMUST00000157709 118 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm25185-201ENSMUST00000157754 96 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm25335-201ENSMUST00000158043 103 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm16290-201ENSMUST00000161175 474 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Mir6345-201ENSMUST00000184286 128 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm38053-201ENSMUST00000193938 160 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm8745-201ENSMUST00000207846 782 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm45162-201ENSMUST00000209013 618 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm19140-201ENSMUST00000209790 421 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Gm45530-201ENSMUST00000211658 225 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 AC138667.2-201ENSMUST00000224880 598 ntBASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc9Q8VC31 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Mir297a-2-201ENSMUST00000103795 90 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Mir1193-201ENSMUST00000116761 121 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm13379-201ENSMUST00000118053 621 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm15113-201ENSMUST00000119280 836 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm14392-201ENSMUST00000120332 401 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm14162-201ENSMUST00000121985 601 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm11344-201ENSMUST00000122011 335 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm28002-201ENSMUST00000184832 100 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm18667-201ENSMUST00000186523 484 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm8041-201ENSMUST00000199755 616 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm43976-201ENSMUST00000203637 235 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm44687-201ENSMUST00000204975 235 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm44794-201ENSMUST00000206550 411 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm44959-201ENSMUST00000209127 231 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm45387-201ENSMUST00000209792 632 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm5548-201ENSMUST00000055878 397 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm23093-201ENSMUST00000083450 102 ntBASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc9Q8VC31 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Ccdc9Q8VC31 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Ccdc9Q8VC31 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms