Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.98□□□□□ -1.45
Trim35Q8C006 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.98□□□□□ -1.45
Trim35Q8C006 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim35Q8C006 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm25415-201ENSMUST00000104220 132 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm14382-201ENSMUST00000117374 437 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm15613-201ENSMUST00000118396 326 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm23253-201ENSMUST00000157441 104 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm25246-201ENSMUST00000175476 69 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm27602-201ENSMUST00000183861 111 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm6060-201ENSMUST00000188671 251 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm37430-201ENSMUST00000193039 196 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim35Q8C006 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 AC135292.1-201ENSMUST00000227665 204 ntBASIC5.97□□□□□ -1.45
Trim35Q8C006 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim35Q8C006 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Trim35Q8C006 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim35Q8C006 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim35Q8C006 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim35Q8C006 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Trim35Q8C006 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim35Q8C006 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Trim35Q8C006 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim35Q8C006 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.96□□□□□ -1.45
Trim35Q8C006 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.96□□□□□ -1.46
Trim35Q8C006 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim35Q8C006 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim35Q8C006 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim35Q8C006 Gm24572-201ENSMUST00000175505 88 ntBASIC5.96□□□□□ -1.46
Trim35Q8C006 Gm29454-201ENSMUST00000190805 393 ntBASIC5.96□□□□□ -1.46
Trim35Q8C006 Gm19096-201ENSMUST00000209705 766 ntBASIC5.96□□□□□ -1.46
Trim35Q8C006 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC5.96□□□□□ -1.46
Trim35Q8C006 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.96□□□□□ -1.46
Trim35Q8C006 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim35Q8C006 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.96□□□□□ -1.46
Trim35Q8C006 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim35Q8C006 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Trim35Q8C006 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim35Q8C006 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Trim35Q8C006 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.96□□□□□ -1.46
Trim35Q8C006 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Mir700-201ENSMUST00000102169 79 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm23713-201ENSMUST00000157353 70 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm22615-201ENSMUST00000158102 70 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Mir6361-201ENSMUST00000185079 101 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm42739-201ENSMUST00000200687 226 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm44312-201ENSMUST00000203536 469 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.95□□□□□ -1.46
Trim35Q8C006 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 AC124400.1-201ENSMUST00000225779 193 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm24948-201ENSMUST00000082866 207 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Trim35Q8C006 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.95□□□□□ -1.46
Trim35Q8C006 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trim35Q8C006 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.95□□□□□ -1.46
Trim35Q8C006 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim35Q8C006 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim35Q8C006 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim35Q8C006 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim35Q8C006 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim35Q8C006 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim35Q8C006 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Trim35Q8C006 Gm13193-201ENSMUST00000117275 225 ntBASIC5.94□□□□□ -1.46
Trim35Q8C006 Gm13998-201ENSMUST00000120952 335 ntBASIC5.94□□□□□ -1.46
Trim35Q8C006 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms