Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim56Q80VI1 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.84□□□□□ -1.64
Trim56Q80VI1 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Trim56Q80VI1 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Trim56Q80VI1 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm23319-201ENSMUST00000104467 131 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm26147-201ENSMUST00000104479 114 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm13153-201ENSMUST00000120969 637 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm23000-201ENSMUST00000157083 139 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm25386-201ENSMUST00000157814 288 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Mir3104-201ENSMUST00000174911 63 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm43284-201ENSMUST00000200103 253 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm44076-201ENSMUST00000203072 520 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm43925-201ENSMUST00000203498 206 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm8940-201ENSMUST00000212585 219 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm46138-201ENSMUST00000215294 426 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm23650-201ENSMUST00000083355 70 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.83□□□□□ -1.64
Trim56Q80VI1 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim56Q80VI1 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm23653-201ENSMUST00000116751 97 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm14792-201ENSMUST00000119725 258 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm12042-201ENSMUST00000120479 301 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm13396-201ENSMUST00000120617 271 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm7618-201ENSMUST00000121643 171 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm22514-201ENSMUST00000122547 308 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 n-R5s87-201ENSMUST00000122752 116 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm11281-201ENSMUST00000141391 576 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm22219-201ENSMUST00000157562 319 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm27747-201ENSMUST00000184707 85 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Mir6372-201ENSMUST00000185114 109 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm37801-201ENSMUST00000194754 274 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm43028-201ENSMUST00000202561 481 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm44157-201ENSMUST00000204720 410 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm45508-201ENSMUST00000209298 299 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm23932-201ENSMUST00000082914 107 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Mir346-201ENSMUST00000083547 98 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim56Q80VI1 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.82□□□□□ -1.64
Trim56Q80VI1 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim56Q80VI1 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim56Q80VI1 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim56Q80VI1 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Mir875-201ENSMUST00000104698 78 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm14825-201ENSMUST00000113538 701 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm14940-201ENSMUST00000119309 495 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm2182-201ENSMUST00000145243 663 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm22336-201ENSMUST00000157719 107 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm23759-201ENSMUST00000158351 268 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm24501-201ENSMUST00000158452 62 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm8292-201ENSMUST00000162574 396 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm16232-201ENSMUST00000162856 167 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm26195-201ENSMUST00000175035 101 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm26219-201ENSMUST00000175216 71 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm26501-201ENSMUST00000178307 107 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm25939-201ENSMUST00000179876 191 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm27803-201ENSMUST00000183763 119 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm28118-201ENSMUST00000185957 294 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm28471-201ENSMUST00000185994 615 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm4644-201ENSMUST00000197587 400 ntBASIC4.81□□□□□ -1.64
Trim56Q80VI1 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms