Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm24075-201ENSMUST00000158175 72 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm23583-201ENSMUST00000158533 289 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm23505-201ENSMUST00000158989 130 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm2855-201ENSMUST00000166765 456 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm25707-201ENSMUST00000175120 96 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm25476-201ENSMUST00000175125 185 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Mir6372-201ENSMUST00000185114 109 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm37946-201ENSMUST00000192064 347 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm44050-201ENSMUST00000204263 527 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm6796-201ENSMUST00000211919 243 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm23932-201ENSMUST00000082914 107 ntBASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav6-2Q5R1I4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Trav6-2Q5R1I4 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Trav6-2Q5R1I4 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.34□□□□□ -2.04
Trav6-2Q5R1I4 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm6923-201ENSMUST00000118343 406 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm12891-201ENSMUST00000119358 240 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm6587-201ENSMUST00000120219 613 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm26348-201ENSMUST00000157528 240 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm23317-201ENSMUST00000157999 129 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm24876-201ENSMUST00000158780 92 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm28146-201ENSMUST00000185517 701 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm18448-201ENSMUST00000186286 599 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm29640-201ENSMUST00000187972 278 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm42805-201ENSMUST00000196158 276 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm43384-201ENSMUST00000200569 637 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm43004-201ENSMUST00000201872 703 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm43264-201ENSMUST00000202284 325 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm44266-201ENSMUST00000205235 500 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm18346-201ENSMUST00000216782 325 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm7753-201ENSMUST00000221007 867 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
Trav6-2Q5R1I4 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Snord14c-201ENSMUST00000101927 86 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm13574-201ENSMUST00000120482 394 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm25413-201ENSMUST00000158544 312 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm20534-201ENSMUST00000172957 172 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Snord53-201ENSMUST00000175146 78 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Mir7068-201ENSMUST00000183439 74 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm37987-201ENSMUST00000194999 825 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm18691-201ENSMUST00000203593 872 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm19177-201ENSMUST00000204520 613 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm6842-201ENSMUST00000211361 390 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm18015-201ENSMUST00000214879 316 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Mir127-201ENSMUST00000093568 70 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trav6-2Q5R1I4 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm14751-201ENSMUST00000117693 222 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm15312-201ENSMUST00000118827 271 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm15112-201ENSMUST00000120152 860 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm11430-201ENSMUST00000121317 217 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm15309-201ENSMUST00000121644 240 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm24962-201ENSMUST00000157917 109 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm22534-201ENSMUST00000158173 104 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm5277-201ENSMUST00000164923 556 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm27659-201ENSMUST00000183472 98 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Mir6383-201ENSMUST00000184545 116 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm29330-201ENSMUST00000190032 699 ntBASIC2.31□□□□□ -2.04
Trav6-2Q5R1I4 Gm28098-201ENSMUST00000191361 699 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 1153.4 ms