Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm42924-201ENSMUST00000197261 185 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Gm6615-201ENSMUST00000199426 631 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Gm43384-201ENSMUST00000200569 637 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Gm17911-201ENSMUST00000210806 877 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Gm18252-203ENSMUST00000215855 757 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Gm19540-201ENSMUST00000221843 810 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Gm25856-201ENSMUST00000082786 75 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Trav8d-2Q5R1B6 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm26341-201ENSMUST00000104561 134 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm12016-201ENSMUST00000119079 681 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm23032-201ENSMUST00000157995 107 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm24552-201ENSMUST00000158646 103 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm37946-201ENSMUST00000192064 347 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm44520-201ENSMUST00000205447 802 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm25130-201ENSMUST00000082650 156 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm22507-201ENSMUST00000082773 160 ntBASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav8d-2Q5R1B6 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm22752-201ENSMUST00000102083 109 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Mir344e-201ENSMUST00000104677 66 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm14159-201ENSMUST00000119832 451 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm26411-201ENSMUST00000157668 107 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm16289-201ENSMUST00000162079 183 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm28438-201ENSMUST00000188299 345 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm28650-201ENSMUST00000188413 411 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm44161-201ENSMUST00000203532 253 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm45814-201ENSMUST00000212646 775 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Trav8d-2Q5R1B6 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm13627-201ENSMUST00000119700 706 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm23867-201ENSMUST00000122649 274 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Snord53-201ENSMUST00000175146 78 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm28688-201ENSMUST00000187301 268 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm38213-201ENSMUST00000193203 173 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm38041-201ENSMUST00000194445 661 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm44718-201ENSMUST00000206886 359 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Trav8d-2Q5R1B6 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms