Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm25579-201ENSMUST00000083407 106 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.52□□□□□ -1.69
Rnf180Q3U827 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Rnf180Q3U827 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm14355-201ENSMUST00000117352 264 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm15037-201ENSMUST00000120358 259 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm11556-201ENSMUST00000120751 288 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm6565-201ENSMUST00000121217 438 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm4916-201ENSMUST00000126139 642 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm14333-201ENSMUST00000130484 264 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm24240-201ENSMUST00000157785 135 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm20543-201ENSMUST00000174200 726 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm27952-201ENSMUST00000184748 105 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm28418-201ENSMUST00000186179 423 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm28724-202ENSMUST00000194218 295 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.51□□□□□ -1.69
Rnf180Q3U827 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm6361-201ENSMUST00000091031 435 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Rnf180Q3U827 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.51□□□□□ -1.69
Rnf180Q3U827 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Rnf180Q3U827 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm13711-201ENSMUST00000119708 453 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm12872-201ENSMUST00000121835 320 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm12226-201ENSMUST00000144172 876 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm22378-201ENSMUST00000157481 111 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm24681-201ENSMUST00000158760 107 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm25243-201ENSMUST00000174912 207 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm26189-201ENSMUST00000179879 107 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm37692-201ENSMUST00000192633 232 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm44041-201ENSMUST00000203678 396 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.5□□□□□ -1.69
Rnf180Q3U827 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.5□□□□□ -1.69
Rnf180Q3U827 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Rnf180Q3U827 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Rnf180Q3U827 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Rnf180Q3U827 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Rnf180Q3U827 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm25111-201ENSMUST00000116686 147 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm12765-201ENSMUST00000117273 615 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm12137-201ENSMUST00000119565 346 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm13409-201ENSMUST00000122072 546 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm24857-201ENSMUST00000158061 310 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm23523-201ENSMUST00000180190 107 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm7858-201ENSMUST00000190177 622 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm36934-201ENSMUST00000192007 306 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm37743-201ENSMUST00000194645 376 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 AC154390.1-201ENSMUST00000225629 277 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.49□□□□□ -1.69
Rnf180Q3U827 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.48□□□□□ -1.69
Rnf180Q3U827 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms