Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.29□□□□□ -1.88
NcanP55066 Gm19620-201ENSMUST00000195972 434 ntBASIC3.29□□□□□ -1.88
NcanP55066 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NcanP55066 Gm44720-201ENSMUST00000206076 260 ntBASIC3.29□□□□□ -1.88
NcanP55066 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.29□□□□□ -1.88
NcanP55066 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NcanP55066 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.29□□□□□ -1.88
NcanP55066 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.29□□□□□ -1.88
NcanP55066 Gm24950-201ENSMUST00000082768 191 ntBASIC3.29□□□□□ -1.88
NcanP55066 Gm23971-201ENSMUST00000083317 191 ntBASIC3.29□□□□□ -1.88
NcanP55066 Gm23849-201ENSMUST00000083833 191 ntBASIC3.29□□□□□ -1.88
NcanP55066 Gm26316-201ENSMUST00000083886 191 ntBASIC3.29□□□□□ -1.88
NcanP55066 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.29□□□□□ -1.88
NcanP55066 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NcanP55066 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NcanP55066 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NcanP55066 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
NcanP55066 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NcanP55066 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NcanP55066 Gm11367-201ENSMUST00000117802 120 ntBASIC3.28□□□□□ -1.88
NcanP55066 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm11219-201ENSMUST00000118565 358 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm13228-201ENSMUST00000118937 634 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm12891-201ENSMUST00000119358 240 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm14570-201ENSMUST00000119444 391 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm23463-201ENSMUST00000122468 99 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm22988-201ENSMUST00000122759 144 ntBASIC3.28□□□□□ -1.88
NcanP55066 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NcanP55066 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.28□□□□□ -1.88
NcanP55066 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.28□□□□□ -1.88
NcanP55066 Gm23473-201ENSMUST00000158883 116 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm28666-201ENSMUST00000186649 274 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.28□□□□□ -1.88
NcanP55066 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.28□□□□□ -1.88
NcanP55066 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.28□□□□□ -1.88
NcanP55066 Gm6796-201ENSMUST00000211919 243 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.28□□□□□ -1.88
NcanP55066 Gm2446-201ENSMUST00000220144 772 ntBASIC3.28□□□□□ -1.88
NcanP55066 AC130823.2-201ENSMUST00000226169 290 ntBASIC3.28□□□□□ -1.88
NcanP55066 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NcanP55066 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NcanP55066 Gm10038-201ENSMUST00000077233 441 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm9174-201ENSMUST00000078149 255 ntBASIC3.28□□□□□ -1.88
NcanP55066 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NcanP55066 Gm26128-201ENSMUST00000083170 110 ntBASIC3.28□□□□□ -1.88
NcanP55066 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
NcanP55066 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NcanP55066 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NcanP55066 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NcanP55066 Gm22591-201ENSMUST00000104243 106 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm14880-201ENSMUST00000117581 292 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm12492-201ENSMUST00000117665 564 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm15844-201ENSMUST00000118016 576 ntBASIC3.27□□□□□ -1.89
NcanP55066 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm14982-201ENSMUST00000121102 442 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm23885-201ENSMUST00000122682 294 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.27□□□□□ -1.89
NcanP55066 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.27□□□□□ -1.89
NcanP55066 Gm25666-201ENSMUST00000157702 107 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm24601-201ENSMUST00000157970 143 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm23895-201ENSMUST00000158108 160 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm10075-201ENSMUST00000162030 545 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm3370-201ENSMUST00000171785 500 ntBASIC3.27□□□□□ -1.89
NcanP55066 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.27□□□□□ -1.89
NcanP55066 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
NcanP55066 Gm29641-201ENSMUST00000188955 259 ntBASIC3.27□□□□□ -1.89
NcanP55066 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NcanP55066 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.27□□□□□ -1.89
NcanP55066 Gm37431-201ENSMUST00000195102 111 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.27□□□□□ -1.89
NcanP55066 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.27□□□□□ -1.89
NcanP55066 Gm44990-201ENSMUST00000203922 217 ntBASIC3.27□□□□□ -1.89
NcanP55066 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.27□□□□□ -1.89
NcanP55066 Gm30674-201ENSMUST00000214523 392 ntBASIC3.27□□□□□ -1.89
NcanP55066 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.27□□□□□ -1.89
NcanP55066 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.27□□□□□ -1.89
NcanP55066 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.27□□□□□ -1.89
NcanP55066 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.27□□□□□ -1.89
NcanP55066 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.27□□□□□ -1.89
NcanP55066 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NcanP55066 Gm23847-201ENSMUST00000083829 110 ntBASIC3.27□□□□□ -1.89
NcanP55066 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NcanP55066 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NcanP55066 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.27□□□□□ -1.89
NcanP55066 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NcanP55066 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NcanP55066 AC134917.1-201ENSMUST00000220517 1449 ntBASIC3.27□□□□□ -1.89
NcanP55066 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NcanP55066 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NcanP55066 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NcanP55066 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
NcanP55066 Mir669o-201ENSMUST00000103898 96 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
NcanP55066 Gm23551-201ENSMUST00000116852 121 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm13454-201ENSMUST00000118166 483 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm6923-201ENSMUST00000118343 406 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm14566-201ENSMUST00000118915 321 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm11429-201ENSMUST00000119089 144 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm14008-201ENSMUST00000120483 274 ntBASIC3.26□□□□□ -1.89
NcanP55066 Gm11438-201ENSMUST00000121582 189 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms