Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RaraP11416 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.79□□□□□ -1.64
RaraP11416 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RaraP11416 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RaraP11416 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
RaraP11416 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RaraP11416 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RaraP11416 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RaraP11416 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RaraP11416 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RaraP11416 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
RaraP11416 Gm24578-201ENSMUST00000103970 129 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm25875-201ENSMUST00000104323 107 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm10552-201ENSMUST00000113396 372 ntBASIC4.79□□□□□ -1.64
RaraP11416 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RaraP11416 Gm14304-201ENSMUST00000117272 446 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm14971-201ENSMUST00000117980 663 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm14881-201ENSMUST00000120366 372 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.79□□□□□ -1.64
RaraP11416 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.79□□□□□ -1.64
RaraP11416 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RaraP11416 Gm22355-201ENSMUST00000175531 96 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm36946-201ENSMUST00000192706 435 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm16419-201ENSMUST00000221057 625 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm23510-201ENSMUST00000083083 163 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm26066-201ENSMUST00000083385 109 ntBASIC4.79□□□□□ -1.64
RaraP11416 Mir10a-201ENSMUST00000083585 110 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.79□□□□□ -1.64
RaraP11416 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.79□□□□□ -1.64
RaraP11416 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RaraP11416 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.79□□□□□ -1.64
RaraP11416 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RaraP11416 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RaraP11416 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RaraP11416 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RaraP11416 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RaraP11416 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.78□□□□□ -1.64
RaraP11416 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
RaraP11416 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RaraP11416 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.78□□□□□ -1.64
RaraP11416 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RaraP11416 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RaraP11416 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RaraP11416 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RaraP11416 Gm22020-201ENSMUST00000104358 136 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm24160-201ENSMUST00000104594 126 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm12125-201ENSMUST00000117261 736 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm11673-201ENSMUST00000117846 331 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm13729-201ENSMUST00000120328 406 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm11584-201ENSMUST00000120636 325 ntBASIC4.78□□□□□ -1.64
RaraP11416 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.78□□□□□ -1.64
RaraP11416 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.78□□□□□ -1.64
RaraP11416 Gm22145-201ENSMUST00000157396 148 ntBASIC4.78□□□□□ -1.64
RaraP11416 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm24487-201ENSMUST00000178017 63 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm44076-201ENSMUST00000203072 520 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm45002-201ENSMUST00000208045 120 ntBASIC4.78□□□□□ -1.64
RaraP11416 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.78□□□□□ -1.64
RaraP11416 CT485612.4-201ENSMUST00000223405 250 ntBASIC4.78□□□□□ -1.64
RaraP11416 LOC667541-201ENSMUST00000223408 278 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm5899-201ENSMUST00000071770 270 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm23625-201ENSMUST00000082457 100 ntBASIC4.78□□□□□ -1.64
RaraP11416 Gm23041-201ENSMUST00000083868 106 ntBASIC4.78□□□□□ -1.64
RaraP11416 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RaraP11416 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RaraP11416 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RaraP11416 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RaraP11416 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RaraP11416 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.78□□□□□ -1.64
RaraP11416 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RaraP11416 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RaraP11416 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RaraP11416 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RaraP11416 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RaraP11416 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RaraP11416 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RaraP11416 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RaraP11416 Mir541-201ENSMUST00000102097 90 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm12417-201ENSMUST00000119153 403 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm15244-201ENSMUST00000121122 130 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RaraP11416 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC4.77□□□□□ -1.65
RaraP11416 Gm16060-201ENSMUST00000153140 478 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm25637-201ENSMUST00000157529 107 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm22113-201ENSMUST00000158343 104 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm23474-201ENSMUST00000158884 75 ntBASIC4.77□□□□□ -1.65
RaraP11416 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RaraP11416 Mir5129-201ENSMUST00000174938 78 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm26195-201ENSMUST00000175035 101 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm9379-201ENSMUST00000196790 646 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm43309-201ENSMUST00000200837 458 ntBASIC4.77□□□□□ -1.65
RaraP11416 Gm45513-201ENSMUST00000210228 376 ntBASIC4.77□□□□□ -1.65
RaraP11416 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.77□□□□□ -1.65
RaraP11416 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.77□□□□□ -1.65
RaraP11416 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.77□□□□□ -1.65
RaraP11416 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RaraP11416 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
RaraP11416 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RaraP11416 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RaraP11416 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms