Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm22072-201ENSMUST00000116850 121 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm9009-201ENSMUST00000117321 326 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm12268-201ENSMUST00000118398 442 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm14887-201ENSMUST00000119522 663 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm23885-201ENSMUST00000122682 294 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm24443-201ENSMUST00000157242 132 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm23895-201ENSMUST00000158108 160 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm23380-201ENSMUST00000158448 103 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm7582-201ENSMUST00000160831 603 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm9593-201ENSMUST00000166034 469 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Mir7j-201ENSMUST00000184427 122 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm29045-201ENSMUST00000187278 698 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm37727-201ENSMUST00000191637 819 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm37104-201ENSMUST00000193278 196 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm43556-201ENSMUST00000196186 681 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm44720-201ENSMUST00000206076 260 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm23503-201ENSMUST00000083903 107 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
H2afb2S4R1M3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm24127-201ENSMUST00000104110 130 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm24403-201ENSMUST00000104616 130 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm13082-201ENSMUST00000118877 561 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm25807-201ENSMUST00000122783 305 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm22330-201ENSMUST00000158068 115 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm24876-201ENSMUST00000158780 92 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm26960-201ENSMUST00000182263 412 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Mir6405-201ENSMUST00000184584 124 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm29452-201ENSMUST00000187996 313 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm28860-201ENSMUST00000188103 313 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm29950-201ENSMUST00000195273 237 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm43652-201ENSMUST00000196219 675 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm5551-201ENSMUST00000199720 690 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm45588-201ENSMUST00000211213 630 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm17890-201ENSMUST00000221419 757 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 CT010505.1-201ENSMUST00000227026 396 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
H2afb2S4R1M3 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm25088-201ENSMUST00000101803 79 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm22771-201ENSMUST00000104449 91 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm14793-201ENSMUST00000118739 311 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm13239-201ENSMUST00000119920 637 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm2020-201ENSMUST00000145242 579 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm26348-201ENSMUST00000157528 240 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm17166-201ENSMUST00000172006 431 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Snord53-201ENSMUST00000175146 78 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm26701-201ENSMUST00000181571 234 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm18403-201ENSMUST00000192907 529 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm44266-201ENSMUST00000205235 500 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm45048-201ENSMUST00000207058 429 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm18225-201ENSMUST00000216708 742 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 Gm20304-201ENSMUST00000218168 444 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.79□□□□□ -1.96
H2afb2S4R1M3 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms