Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Gm37624-201ENSMUST00000193751 219 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Gm9442-201ENSMUST00000194242 319 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim39Q9ESN2 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Gm7040-201ENSMUST00000223271 443 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Gm24611-201ENSMUST00000083272 107 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Mir504-201ENSMUST00000093602 79 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim39Q9ESN2 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.53□□□□□ -1.68
Trim39Q9ESN2 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Trim39Q9ESN2 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm11550-201ENSMUST00000118210 699 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm11804-201ENSMUST00000121663 468 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm14770-201ENSMUST00000122197 312 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm23752-201ENSMUST00000157584 115 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm23209-201ENSMUST00000158667 110 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Mir7037-201ENSMUST00000184414 65 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm28957-201ENSMUST00000190174 373 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm18325-201ENSMUST00000203228 835 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Gm25411-201ENSMUST00000083760 151 ntBASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim39Q9ESN2 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm26067-201ENSMUST00000103789 110 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm22936-201ENSMUST00000103955 126 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm15426-201ENSMUST00000117823 556 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm12039-201ENSMUST00000118219 180 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm13557-201ENSMUST00000120771 382 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm22611-201ENSMUST00000158288 150 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm24885-201ENSMUST00000158783 270 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm27851-201ENSMUST00000183529 63 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm27465-201ENSMUST00000184290 91 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Mir338-201ENSMUST00000083666 98 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.51□□□□□ -1.69
Trim39Q9ESN2 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm15148-201ENSMUST00000117602 156 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm25389-201ENSMUST00000157340 286 ntBASIC4.5□□□□□ -1.69
Trim39Q9ESN2 Gm24006-201ENSMUST00000158462 132 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms