Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm22758-201ENSMUST00000102275 96 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm15382-201ENSMUST00000118011 537 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm14159-201ENSMUST00000119832 451 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm5958-201ENSMUST00000147698 297 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm25224-201ENSMUST00000158195 68 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm20693-201ENSMUST00000177431 211 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm22367-201ENSMUST00000178930 132 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm44385-201ENSMUST00000198781 81 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm44274-201ENSMUST00000203417 256 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm46146-201ENSMUST00000217483 346 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm10088-201ENSMUST00000074116 423 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.14□□□□□ -1.75
Ccdc9Q8VC31 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm5757-201ENSMUST00000117494 528 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm14897-201ENSMUST00000118213 207 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm22479-201ENSMUST00000122566 81 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm13901-201ENSMUST00000137252 468 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm24503-201ENSMUST00000158454 135 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm25163-201ENSMUST00000158905 104 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm22858-201ENSMUST00000174972 76 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm6625-201ENSMUST00000177870 272 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm23568-201ENSMUST00000177960 92 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm24829-201ENSMUST00000179245 92 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm37416-201ENSMUST00000193596 318 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm37616-201ENSMUST00000193974 322 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm43039-201ENSMUST00000202883 963 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm45105-201ENSMUST00000207824 397 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Mir421-201ENSMUST00000083575 76 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc9Q8VC31 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm12607-201ENSMUST00000120724 493 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm15014-201ENSMUST00000120742 258 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm12755-201ENSMUST00000122297 282 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm25781-201ENSMUST00000122527 84 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm23141-201ENSMUST00000178682 94 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm22621-201ENSMUST00000179678 74 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm28629-201ENSMUST00000187309 263 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm20734-201ENSMUST00000216939 193 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm9765-201ENSMUST00000043170 321 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm10042-201ENSMUST00000079884 78 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm22810-201ENSMUST00000082741 158 ntBASIC4.12□□□□□ -1.75
Ccdc9Q8VC31 Gm23297-201ENSMUST00000083184 127 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms