Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm23815-201ENSMUST00000083231 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm25790-201ENSMUST00000083293 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm22295-201ENSMUST00000083311 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm25127-201ENSMUST00000083336 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm25583-201ENSMUST00000083413 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm24414-201ENSMUST00000083434 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm23095-201ENSMUST00000083446 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm24803-201ENSMUST00000083693 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm22580-201ENSMUST00000083727 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm24260-201ENSMUST00000083741 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm22682-201ENSMUST00000083854 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm25869-201ENSMUST00000083855 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm24693-201ENSMUST00000083885 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm26317-201ENSMUST00000083894 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm22798-201ENSMUST00000083992 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm26427-201ENSMUST00000093648 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm22444-201ENSMUST00000093693 108 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Gm22170-201ENSMUST00000097247 107 ntBASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Col6a6Q8C6K9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Col6a6Q8C6K9 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
Col6a6Q8C6K9 Gm12550-201ENSMUST00000118478 329 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm14215-201ENSMUST00000120578 221 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm43739-201ENSMUST00000198294 307 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm43431-201ENSMUST00000198577 340 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm19177-201ENSMUST00000204520 613 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm43404-201ENSMUST00000200424 2534 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm12934-201ENSMUST00000119221 343 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm13366-201ENSMUST00000122198 970 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm43489-201ENSMUST00000196810 993 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm45367-201ENSMUST00000210171 347 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm20039-201ENSMUST00000210329 394 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 AC151907.1-201ENSMUST00000228812 412 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Gm45130-201ENSMUST00000207574 3388 ntBASIC1.4□□□□□ -2.19
Col6a6Q8C6K9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm12294-201ENSMUST00000119723 490 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm13913-201ENSMUST00000121126 260 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm27979-201ENSMUST00000185126 56 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm28200-201ENSMUST00000187778 315 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm29378-201ENSMUST00000188723 315 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm28909-201ENSMUST00000189406 315 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 AC124356.2-201ENSMUST00000221874 336 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm22740-201ENSMUST00000083439 109 ntBASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Col6a6Q8C6K9 Gm24541-201ENSMUST00000103871 96 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm22225-201ENSMUST00000157358 278 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm3102-201ENSMUST00000164236 489 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm9022-202ENSMUST00000183285 483 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm27656-201ENSMUST00000185055 80 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm37817-201ENSMUST00000195276 434 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm43659-201ENSMUST00000200894 628 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm25099-201ENSMUST00000093716 116 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm13876-201ENSMUST00000118451 261 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm25606-201ENSMUST00000158363 95 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.38□□□□□ -2.19
Col6a6Q8C6K9 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm13194-201ENSMUST00000142299 311 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm24546-201ENSMUST00000158652 102 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm25976-201ENSMUST00000158695 130 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm6788-201ENSMUST00000166459 270 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm27271-201ENSMUST00000183509 170 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm44349-201ENSMUST00000197048 123 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 AC241593.1-201ENSMUST00000224768 397 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 AC099612.2-201ENSMUST00000226824 721 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm25796-201ENSMUST00000082645 163 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.37□□□□□ -2.19
Col6a6Q8C6K9 Gm13210-201ENSMUST00000121483 273 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms