Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Usf1Q61069 Mir466n-201ENSMUST00000104798 94 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Usf1Q61069 Gm11219-201ENSMUST00000118565 358 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Gm14593-201ENSMUST00000119948 294 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Gm5646-201ENSMUST00000120568 714 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Gm8880-201ENSMUST00000121800 454 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Gm23325-201ENSMUST00000157422 129 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Gm27676-201ENSMUST00000183669 61 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Gm29600-201ENSMUST00000188687 377 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.59□□□□□ -1.99
Usf1Q61069 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.59□□□□□ -1.99
Usf1Q61069 Gm19563-201ENSMUST00000222031 270 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Usf1Q61069 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.59□□□□□ -1.99
Usf1Q61069 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Usf1Q61069 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Usf1Q61069 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
Usf1Q61069 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Usf1Q61069 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Usf1Q61069 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Usf1Q61069 Gm3940-201ENSMUST00000105087 432 ntBASIC2.58□□□□□ -2
Usf1Q61069 Mir466k-201ENSMUST00000116774 122 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm24274-201ENSMUST00000116787 124 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm8260-201ENSMUST00000119230 353 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm13210-201ENSMUST00000121483 273 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm15065-201ENSMUST00000121699 273 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm11414-201ENSMUST00000121795 263 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.58□□□□□ -2
Usf1Q61069 Gm17119-201ENSMUST00000163943 280 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm25874-201ENSMUST00000178030 79 ntBASIC2.58□□□□□ -2
Usf1Q61069 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.58□□□□□ -2
Usf1Q61069 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.58□□□□□ -2
Usf1Q61069 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.58□□□□□ -2
Usf1Q61069 Mir7242-201ENSMUST00000183710 79 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm8676-201ENSMUST00000184206 637 ntBASIC2.58□□□□□ -2
Usf1Q61069 Mir6905-201ENSMUST00000184228 70 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm17929-201ENSMUST00000186851 627 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm28650-201ENSMUST00000188413 411 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm37692-201ENSMUST00000192633 232 ntBASIC2.58□□□□□ -2
Usf1Q61069 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.58□□□□□ -2
Usf1Q61069 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.58□□□□□ -2
Usf1Q61069 Gm45013-201ENSMUST00000206883 178 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.58□□□□□ -2
Usf1Q61069 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm46103-201ENSMUST00000217614 341 ntBASIC2.58□□□□□ -2
Usf1Q61069 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.58□□□□□ -2
Usf1Q61069 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.58□□□□□ -2
Usf1Q61069 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.58□□□□□ -2
Usf1Q61069 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Usf1Q61069 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.58□□□□□ -2
Usf1Q61069 Gm22265-201ENSMUST00000082947 116 ntBASIC2.58□□□□□ -2
Usf1Q61069 Mir21a-201ENSMUST00000083521 92 ntBASIC2.58□□□□□ -2
Usf1Q61069 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Usf1Q61069 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.58□□□□□ -2
Usf1Q61069 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.58□□□□□ -2
Usf1Q61069 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Usf1Q61069 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.57□□□□□ -2
Usf1Q61069 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm25529-201ENSMUST00000104850 92 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm13640-201ENSMUST00000118445 264 ntBASIC2.57□□□□□ -2
Usf1Q61069 DQ267100-201ENSMUST00000122600 72 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm24240-201ENSMUST00000157785 135 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm24075-201ENSMUST00000158175 72 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm24552-201ENSMUST00000158646 103 ntBASIC2.57□□□□□ -2
Usf1Q61069 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.57□□□□□ -2
Usf1Q61069 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm21893-201ENSMUST00000179119 397 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm26928-201ENSMUST00000182674 572 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.57□□□□□ -2
Usf1Q61069 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.57□□□□□ -2
Usf1Q61069 Mir378a-201ENSMUST00000198300 66 ntBASIC2.57□□□□□ -2
Usf1Q61069 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.57□□□□□ -2
Usf1Q61069 Gm19649-201ENSMUST00000201126 822 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.57□□□□□ -2
Usf1Q61069 Gm45382-201ENSMUST00000210607 151 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm6012-201ENSMUST00000210821 730 ntBASIC2.57□□□□□ -2
Usf1Q61069 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm17872-201ENSMUST00000222550 532 ntBASIC2.57□□□□□ -2
Usf1Q61069 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm10088-201ENSMUST00000074116 423 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm26494-201ENSMUST00000083154 143 ntBASIC2.57□□□□□ -2
Usf1Q61069 Gm24493-201ENSMUST00000083805 143 ntBASIC2.57□□□□□ -2
Usf1Q61069 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Usf1Q61069 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.57□□□□□ -2
Usf1Q61069 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Usf1Q61069 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Usf1Q61069 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.56□□□□□ -2
Usf1Q61069 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.56□□□□□ -2
Usf1Q61069 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Usf1Q61069 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.56□□□□□ -2
Usf1Q61069 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Usf1Q61069 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.56□□□□□ -2
Usf1Q61069 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.56□□□□□ -2
Usf1Q61069 Gm9850-201ENSMUST00000117916 227 ntBASIC2.56□□□□□ -2
Usf1Q61069 Gm13901-201ENSMUST00000137252 468 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms