Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col28a1Q2UY11 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Col28a1Q2UY11 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col28a1Q2UY11 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col28a1Q2UY11 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Col28a1Q2UY11 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col28a1Q2UY11 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Col28a1Q2UY11 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Col28a1Q2UY11 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm25316-201ENSMUST00000116826 118 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm9850-201ENSMUST00000117916 227 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm16017-201ENSMUST00000119834 208 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm12897-201ENSMUST00000120341 250 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm14761-201ENSMUST00000121363 262 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm14775-201ENSMUST00000122089 310 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm29231-201ENSMUST00000179850 319 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm28785-201ENSMUST00000187478 379 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm28872-201ENSMUST00000191518 158 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm18429-201ENSMUST00000198707 421 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm44655-201ENSMUST00000207768 423 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm45162-201ENSMUST00000209013 618 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm45553-201ENSMUST00000209929 507 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm25853-201ENSMUST00000082793 132 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm23939-201ENSMUST00000082880 133 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm22829-201ENSMUST00000083771 106 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Col28a1Q2UY11 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm24987-201ENSMUST00000104453 134 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm5384-201ENSMUST00000120313 463 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm14240-201ENSMUST00000120353 546 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm14428-201ENSMUST00000120408 822 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm26256-201ENSMUST00000122499 186 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm24059-201ENSMUST00000157493 312 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm23084-201ENSMUST00000157850 114 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm24857-201ENSMUST00000158061 310 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm25977-201ENSMUST00000158697 85 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm25671-201ENSMUST00000178612 105 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm23307-201ENSMUST00000179167 105 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm8807-201ENSMUST00000179328 492 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm25286-201ENSMUST00000179790 105 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Mir6382-201ENSMUST00000184055 110 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm9775-201ENSMUST00000189402 331 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm37603-201ENSMUST00000192368 219 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm38332-201ENSMUST00000194189 147 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm42621-201ENSMUST00000198114 275 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 AC126554.1-201ENSMUST00000222161 271 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Snord42a-201ENSMUST00000082606 65 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Mir19a-201ENSMUST00000083482 82 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.53□□□□□ -1.84
Col28a1Q2UY11 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms