Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm23435-201ENSMUST00000157183 156 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm24059-201ENSMUST00000157493 312 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm22290-201ENSMUST00000177655 107 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm22583-201ENSMUST00000178031 107 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm28843-201ENSMUST00000189198 678 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm29546-201ENSMUST00000191171 678 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm37085-201ENSMUST00000193780 196 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm44223-201ENSMUST00000204854 114 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm44609-201ENSMUST00000207157 460 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm18696-201ENSMUST00000220103 274 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.67□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm12025-201ENSMUST00000117768 144 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm11813-201ENSMUST00000118586 291 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm12137-201ENSMUST00000119565 346 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm23078-201ENSMUST00000157848 148 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm11395-201ENSMUST00000181011 499 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm28098-201ENSMUST00000191361 699 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm5829-201ENSMUST00000191383 351 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.66□□□□□ -1.82
Nkx2-4Q9EQM3 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.65□□□□□ -1.82
Nkx2-4Q9EQM3 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Nkx2-4Q9EQM3 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm6797-201ENSMUST00000119440 512 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm15037-201ENSMUST00000120358 259 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm22034-201ENSMUST00000157283 134 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm26214-201ENSMUST00000158581 107 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm28358-202ENSMUST00000189292 223 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Snord14e-201ENSMUST00000082857 90 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm23093-201ENSMUST00000083450 102 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.65□□□□□ -1.83
Nkx2-4Q9EQM3 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.64□□□□□ -1.83
Nkx2-4Q9EQM3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Nkx2-4Q9EQM3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Nkx2-4Q9EQM3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Nkx2-4Q9EQM3 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.64□□□□□ -1.83
Nkx2-4Q9EQM3 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms