Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm27520-201ENSMUST00000184872 81 ntBASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Mir465-201ENSMUST00000093563 74 ntBASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Smc1aQ9CU62 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Snord14c-201ENSMUST00000101927 86 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm14411-201ENSMUST00000121798 914 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm25979-201ENSMUST00000157177 138 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm26099-201ENSMUST00000157248 109 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm22818-201ENSMUST00000157446 104 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm22817-201ENSMUST00000157448 356 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm23034-201ENSMUST00000158001 147 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm24736-201ENSMUST00000158862 130 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm24757-201ENSMUST00000176987 371 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm29045-201ENSMUST00000187278 698 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm44476-201ENSMUST00000196225 91 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm19457-201ENSMUST00000200995 448 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm43991-201ENSMUST00000203751 274 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm44966-201ENSMUST00000208096 157 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm46103-201ENSMUST00000217614 341 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.23□□□□□ -1.89
Smc1aQ9CU62 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm13555-201ENSMUST00000121668 319 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm22755-201ENSMUST00000157143 100 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm25391-201ENSMUST00000157342 134 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm5967-201ENSMUST00000172723 494 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm20415-201ENSMUST00000172877 423 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm24925-201ENSMUST00000178157 107 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm26928-201ENSMUST00000182674 572 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Mir6405-201ENSMUST00000184584 124 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Mir7050-201ENSMUST00000184636 60 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm27505-201ENSMUST00000185071 110 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm7837-201ENSMUST00000190873 412 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm29192-201ENSMUST00000190942 377 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm1833-201ENSMUST00000191608 682 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm37709-201ENSMUST00000195074 600 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm42924-201ENSMUST00000197261 185 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm42958-201ENSMUST00000197595 318 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm19147-201ENSMUST00000199622 652 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Gm18414-201ENSMUST00000210858 694 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Smc1aQ9CU62 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm14020-201ENSMUST00000118165 662 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm12723-201ENSMUST00000120700 451 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Smc1aQ9CU62 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm8338-201ENSMUST00000163928 363 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Mir8118-201ENSMUST00000183962 129 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm27582-201ENSMUST00000184084 126 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm27869-201ENSMUST00000184327 122 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm30341-201ENSMUST00000194363 289 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm17893-201ENSMUST00000203017 770 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm18729-201ENSMUST00000217230 621 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 AC162934.3-201ENSMUST00000223015 841 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.21□□□□□ -1.9
Smc1aQ9CU62 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms