Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm4945-201ENSMUST00000075152 453 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm23302-201ENSMUST00000082710 100 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm22740-201ENSMUST00000083439 109 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm23096-201ENSMUST00000083447 107 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm25630-201ENSMUST00000084000 162 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.58□□□□□ -1.68
Rnf180Q3U827 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf180Q3U827 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rnf180Q3U827 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm12806-201ENSMUST00000119384 268 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm14883-201ENSMUST00000120179 157 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm11904-201ENSMUST00000120562 248 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm11430-201ENSMUST00000121317 217 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm24464-201ENSMUST00000179697 107 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm33354-201ENSMUST00000195448 906 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm45375-201ENSMUST00000210338 280 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm25818-201ENSMUST00000083282 164 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Rnf180Q3U827 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.57□□□□□ -1.68
Rnf180Q3U827 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Rnf180Q3U827 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm23791-201ENSMUST00000122553 293 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm15900-201ENSMUST00000161584 342 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm28163-201ENSMUST00000187099 325 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm28358-202ENSMUST00000189292 223 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm43669-201ENSMUST00000198229 436 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm44468-201ENSMUST00000199516 105 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm19147-201ENSMUST00000199622 652 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm43406-201ENSMUST00000200356 334 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm44274-201ENSMUST00000203417 256 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm44989-201ENSMUST00000204749 217 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm22423-201ENSMUST00000082861 184 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Snora70-201ENSMUST00000083047 137 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Rnf180Q3U827 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.56□□□□□ -1.68
Rnf180Q3U827 Svet1-201ENSMUST00000209370 3940 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm11432-201ENSMUST00000117334 231 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm11490-201ENSMUST00000118128 272 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm14541-201ENSMUST00000118985 157 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm11798-201ENSMUST00000119150 421 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm24784-201ENSMUST00000157640 62 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm22101-201ENSMUST00000157928 103 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm26468-201ENSMUST00000158644 106 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm8532-201ENSMUST00000179174 461 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm27532-201ENSMUST00000183726 113 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm28579-201ENSMUST00000186143 369 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm32340-201ENSMUST00000192883 259 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Trbv7-201ENSMUST00000193339 402 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Mir7116-201ENSMUST00000195956 70 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm43355-201ENSMUST00000196541 346 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm43723-201ENSMUST00000196886 189 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm44076-201ENSMUST00000203072 520 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm44594-201ENSMUST00000208982 407 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm17990-201ENSMUST00000211728 553 ntBASIC4.55□□□□□ -1.68
Rnf180Q3U827 Gm7751-201ENSMUST00000212868 709 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms