Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm22601-201ENSMUST00000157595 250 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 Gm23977-201ENSMUST00000177871 74 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 Gm10067-201ENSMUST00000179462 348 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 Gm35702-201ENSMUST00000198653 511 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm45814-201ENSMUST00000212646 775 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.32□□□□□ -1.72
Sox9Q04887 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox9Q04887 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm25141-201ENSMUST00000083177 107 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.31□□□□□ -1.72
Sox9Q04887 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox9Q04887 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sox9Q04887 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Sox9Q04887 Gm14537-201ENSMUST00000117464 599 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm7164-201ENSMUST00000117503 450 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm11577-201ENSMUST00000118030 737 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm14852-201ENSMUST00000120065 647 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm22107-201ENSMUST00000122548 100 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sox9Q04887 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sox9Q04887 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sox9Q04887 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm19637-201ENSMUST00000185933 579 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm21088-201ENSMUST00000190875 316 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sox9Q04887 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm43028-201ENSMUST00000202561 481 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm45553-201ENSMUST00000209929 507 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox9Q04887 Gm45730-201ENSMUST00000212560 395 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm46138-201ENSMUST00000215294 426 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Sox9Q04887 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.31□□□□□ -1.72
Sox9Q04887 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox9Q04887 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox9Q04887 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sox9Q04887 Snord68-201ENSMUST00000082516 86 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm26055-201ENSMUST00000083038 107 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm22577-201ENSMUST00000083731 109 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sox9Q04887 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Sox9Q04887 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC4.31□□□□□ -1.72
Sox9Q04887 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Sox9Q04887 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sox9Q04887 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sox9Q04887 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.31□□□□□ -1.72
Sox9Q04887 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Sox9Q04887 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sox9Q04887 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sox9Q04887 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Sox9Q04887 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sox9Q04887 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Sox9Q04887 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.3□□□□□ -1.72
Sox9Q04887 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Mir294-201ENSMUST00000104710 84 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm11448-201ENSMUST00000120427 450 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm12276-201ENSMUST00000121709 301 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm15147-201ENSMUST00000122263 483 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.3□□□□□ -1.72
Sox9Q04887 Gm22314-201ENSMUST00000158007 281 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm22675-201ENSMUST00000158430 104 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm22889-201ENSMUST00000158639 58 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm24876-201ENSMUST00000158780 92 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm22859-201ENSMUST00000174978 122 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Sox9Q04887 Gm7909-201ENSMUST00000182688 614 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Mir6914-201ENSMUST00000184999 69 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.3□□□□□ -1.72
Sox9Q04887 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.3□□□□□ -1.72
Sox9Q04887 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.3□□□□□ -1.72
Sox9Q04887 Gm44765-201ENSMUST00000206927 601 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Gm44927-201ENSMUST00000207573 716 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 AC239878.2-201ENSMUST00000224048 464 ntBASIC4.3□□□□□ -1.72
Sox9Q04887 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.3□□□□□ -1.72
Sox9Q04887 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Sox9Q04887 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Sox9Q04887 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Sox9Q04887 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sox9Q04887 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Sox9Q04887 Gm13510-201ENSMUST00000118659 429 ntBASIC4.29□□□□□ -1.72
Sox9Q04887 Gm11693-201ENSMUST00000119625 565 ntBASIC4.29□□□□□ -1.72
Sox9Q04887 Gm8880-201ENSMUST00000121800 454 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms