Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm25749-201ENSMUST00000175485 111 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm20630-201ENSMUST00000177387 551 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm27254-201ENSMUST00000183926 517 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm29227-201ENSMUST00000187139 315 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm29034-201ENSMUST00000188099 315 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm37568-201ENSMUST00000191755 364 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm37732-201ENSMUST00000194377 316 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm37129-201ENSMUST00000195791 315 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm43304-201ENSMUST00000196803 326 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm42925-201ENSMUST00000197359 285 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm2522-201ENSMUST00000204280 322 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm45879-201ENSMUST00000212521 392 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 AC130829.3-201ENSMUST00000222735 154 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col6a1Q04857 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a1Q04857 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.83□□□□□ -1.64
Col6a1Q04857 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.83□□□□□ -1.64
Col6a1Q04857 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a1Q04857 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a1Q04857 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col6a1Q04857 Mir667-201ENSMUST00000102441 92 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm12118-201ENSMUST00000119766 532 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm23098-201ENSMUST00000157552 299 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm24750-201ENSMUST00000157843 104 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm22389-201ENSMUST00000158193 301 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm24553-201ENSMUST00000158653 131 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm17162-201ENSMUST00000168538 473 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm38183-201ENSMUST00000193189 205 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm38076-201ENSMUST00000193889 450 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm44054-201ENSMUST00000203814 372 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm44879-201ENSMUST00000207007 503 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm7407-201ENSMUST00000208301 568 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm25202-201ENSMUST00000082838 191 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Col6a1Q04857 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Col6a1Q04857 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a1Q04857 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col6a1Q04857 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col6a1Q04857 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.82□□□□□ -1.64
Col6a1Q04857 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a1Q04857 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a1Q04857 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm23422-201ENSMUST00000102000 107 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm11490-201ENSMUST00000118128 272 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm12897-201ENSMUST00000120341 250 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm8880-201ENSMUST00000121800 454 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm26347-201ENSMUST00000157526 131 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm24191-201ENSMUST00000157977 122 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm20660-201ENSMUST00000177515 289 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm25360-201ENSMUST00000178786 191 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm29352-201ENSMUST00000188054 544 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm18602-201ENSMUST00000209794 851 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm10092-201ENSMUST00000077110 180 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm23845-201ENSMUST00000083834 152 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.81□□□□□ -1.64
Col6a1Q04857 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Col6a1Q04857 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Col6a1Q04857 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a1Q04857 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a1Q04857 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a1Q04857 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm25833-201ENSMUST00000104137 133 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm13876-201ENSMUST00000118451 261 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm14541-201ENSMUST00000118985 157 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm12458-201ENSMUST00000119387 495 ntBASIC4.8□□□□□ -1.64
Col6a1Q04857 Gm25104-201ENSMUST00000122476 163 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms