Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox1P53783 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sox1P53783 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sox1P53783 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sox1P53783 Mir881-201ENSMUST00000104844 78 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm11367-201ENSMUST00000117802 120 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm13692-201ENSMUST00000120774 371 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.67□□□□□ -1.66
Sox1P53783 Gm25907-201ENSMUST00000158486 125 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sox1P53783 Gm20534-201ENSMUST00000172957 172 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC4.67□□□□□ -1.66
Sox1P53783 Mir6345-201ENSMUST00000184286 128 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Mir6385-201ENSMUST00000184295 105 ntBASIC4.67□□□□□ -1.66
Sox1P53783 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Sox1P53783 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.67□□□□□ -1.66
Sox1P53783 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC4.67□□□□□ -1.66
Sox1P53783 Gm6303-201ENSMUST00000210123 471 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm45859-201ENSMUST00000212794 214 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.67□□□□□ -1.66
Sox1P53783 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Sox1P53783 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sox1P53783 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.67□□□□□ -1.66
Sox1P53783 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.67□□□□□ -1.66
Sox1P53783 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Sox1P53783 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox1P53783 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox1P53783 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Sox1P53783 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.66□□□□□ -1.66
Sox1P53783 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Sox1P53783 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Sox1P53783 Gm6274-201ENSMUST00000118173 797 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.66□□□□□ -1.66
Sox1P53783 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.66□□□□□ -1.66
Sox1P53783 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Gm22243-201ENSMUST00000178754 120 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Gm45392-201ENSMUST00000210441 214 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Gm9616-201ENSMUST00000221154 781 ntBASIC4.66□□□□□ -1.66
Sox1P53783 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.66□□□□□ -1.66
Sox1P53783 AC164297.3-201ENSMUST00000224238 94 ntBASIC4.66□□□□□ -1.66
Sox1P53783 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Sox1P53783 Gm6462-201ENSMUST00000081488 304 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Gm23932-201ENSMUST00000082914 107 ntBASIC4.66□□□□□ -1.66
Sox1P53783 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sox1P53783 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox1P53783 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Sox1P53783 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox1P53783 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox1P53783 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.66□□□□□ -1.66
Sox1P53783 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Sox1P53783 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Sox1P53783 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.65□□□□□ -1.66
Sox1P53783 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.65□□□□□ -1.66
Sox1P53783 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.65□□□□□ -1.66
Sox1P53783 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.65□□□□□ -1.66
Sox1P53783 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.65□□□□□ -1.66
Sox1P53783 Gm26418-201ENSMUST00000104275 137 ntBASIC4.65□□□□□ -1.67
Sox1P53783 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox1P53783 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm11673-201ENSMUST00000117846 331 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm14560-201ENSMUST00000118672 375 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm12512-201ENSMUST00000119620 217 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm25846-201ENSMUST00000158013 135 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm25535-201ENSMUST00000175364 125 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC4.65□□□□□ -1.67
Sox1P53783 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm18177-201ENSMUST00000188373 404 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm28920-201ENSMUST00000189957 699 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.65□□□□□ -1.67
Sox1P53783 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox1P53783 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Sox1P53783 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Sox1P53783 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox1P53783 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.65□□□□□ -1.67
Sox1P53783 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
Sox1P53783 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Sox1P53783 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Sox1P53783 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Sox1P53783 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Sox1P53783 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sox1P53783 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.64□□□□□ -1.67
Sox1P53783 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Sox1P53783 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.64□□□□□ -1.67
Sox1P53783 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Sox1P53783 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.64□□□□□ -1.67
Sox1P53783 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.64□□□□□ -1.67
Sox1P53783 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.64□□□□□ -1.67
Sox1P53783 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Sox1P53783 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms