Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm24507-201ENSMUST00000157683 134 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm25665-201ENSMUST00000157695 110 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm26085-201ENSMUST00000157900 116 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm25520-201ENSMUST00000158389 118 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm20651-201ENSMUST00000177219 329 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Mir6540-201ENSMUST00000184886 108 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm37713-201ENSMUST00000191746 198 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm43193-201ENSMUST00000197732 441 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm45651-201ENSMUST00000210857 335 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm18320-201ENSMUST00000211304 595 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm45273-201ENSMUST00000211559 281 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm39197-201ENSMUST00000212069 457 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Gm37387-201ENSMUST00000192201 1806 ntBASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ube3bQ9ES34 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Ube3bQ9ES34 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Ube3bQ9ES34 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Ube3bQ9ES34 Gm650-201ENSMUST00000144428 1551 ntBASIC5.59□□□□□ -1.52
Ube3bQ9ES34 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Ube3bQ9ES34 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm22778-201ENSMUST00000104090 128 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm12062-201ENSMUST00000117533 259 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm14037-201ENSMUST00000120576 313 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm23642-201ENSMUST00000157858 258 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm23179-201ENSMUST00000158693 304 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm3338-201ENSMUST00000220982 269 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 AC122320.1-201ENSMUST00000227233 105 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm25930-201ENSMUST00000082785 107 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm26066-201ENSMUST00000083385 109 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Gm22350-201ENSMUST00000083924 156 ntBASIC5.58□□□□□ -1.52
Ube3bQ9ES34 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm26500-201ENSMUST00000101867 106 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Mir667-201ENSMUST00000102441 92 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm12550-201ENSMUST00000118478 329 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm12466-201ENSMUST00000121199 620 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm20450-201ENSMUST00000173652 147 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm27608-201ENSMUST00000184822 162 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm28872-201ENSMUST00000191518 158 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm37617-201ENSMUST00000194309 159 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm43828-201ENSMUST00000196890 639 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm8069-201ENSMUST00000197887 154 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm44261-201ENSMUST00000203337 209 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm4714-201ENSMUST00000203395 279 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm10351-201ENSMUST00000087694 125 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ube3bQ9ES34 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.57□□□□□ -1.52
Ube3bQ9ES34 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Gm9402-201ENSMUST00000196849 388 ntBASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Gm45513-201ENSMUST00000210228 376 ntBASIC5.56□□□□□ -1.52
Ube3bQ9ES34 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Apoo-ps-201ENSMUST00000061241 586 ntBASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ube3bQ9ES34 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms