Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14977-201ENSMUST00000121626 812 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm22059-201ENSMUST00000157544 104 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm23002-201ENSMUST00000179221 107 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm25024-201ENSMUST00000179667 104 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm21850-201ENSMUST00000179792 359 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm27286-201ENSMUST00000184934 179 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm44816-201ENSMUST00000206666 477 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Mir338-201ENSMUST00000083666 98 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm22350-201ENSMUST00000083924 156 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim47Q8C0E3 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm24125-201ENSMUST00000104105 137 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm11065-201ENSMUST00000111462 228 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm14037-201ENSMUST00000120576 313 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm26098-201ENSMUST00000157247 288 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm27875-201ENSMUST00000184425 123 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm6615-201ENSMUST00000199426 631 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm19096-201ENSMUST00000209705 766 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim47Q8C0E3 Gm37387-201ENSMUST00000192201 1806 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm37558-201ENSMUST00000193684 2983 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm26147-201ENSMUST00000104479 114 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm9003-201ENSMUST00000121810 482 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm11506-201ENSMUST00000122414 470 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm25392-201ENSMUST00000157335 297 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm23642-201ENSMUST00000157858 258 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm26028-201ENSMUST00000158660 294 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm20428-201ENSMUST00000174365 283 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm23355-201ENSMUST00000177614 107 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm22450-201ENSMUST00000179641 107 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm23148-201ENSMUST00000180367 107 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Mir6410-201ENSMUST00000184204 104 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm23925-202ENSMUST00000188429 132 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm37713-201ENSMUST00000191746 198 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm9379-201ENSMUST00000196790 646 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm44960-201ENSMUST00000207403 141 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm45273-201ENSMUST00000211559 281 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 CT010449.1-201ENSMUST00000220624 153 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm7093-201ENSMUST00000223004 581 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm23677-201ENSMUST00000083156 104 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm26071-201ENSMUST00000083261 107 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm24521-201ENSMUST00000083958 107 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm4855-201ENSMUST00000192270 1967 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim47Q8C0E3 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm650-201ENSMUST00000144428 1551 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm23014-201ENSMUST00000104144 130 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm15022-201ENSMUST00000122074 746 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Gm24005-201ENSMUST00000158459 296 ntBASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC5.26□□□□□ -1.57
Trim47Q8C0E3 Mir3104-201ENSMUST00000174911 63 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms