Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm28328-201ENSMUST00000188869 109 ntBASIC6.08□□□□□ -1.44
Trim35Q8C006 Gm29097-201ENSMUST00000190273 422 ntBASIC6.08□□□□□ -1.44
Trim35Q8C006 Gm38364-201ENSMUST00000191814 179 ntBASIC6.08□□□□□ -1.44
Trim35Q8C006 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.08□□□□□ -1.44
Trim35Q8C006 AC107757.3-201ENSMUST00000226312 535 ntBASIC6.08□□□□□ -1.44
Trim35Q8C006 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim35Q8C006 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim35Q8C006 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.08□□□□□ -1.44
Trim35Q8C006 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim35Q8C006 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim35Q8C006 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim35Q8C006 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim35Q8C006 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Trim35Q8C006 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim35Q8C006 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim35Q8C006 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm25091-201ENSMUST00000103997 71 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm13167-201ENSMUST00000118554 578 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm13867-201ENSMUST00000120844 395 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm23101-201ENSMUST00000157550 137 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm25013-201ENSMUST00000158402 128 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim35Q8C006 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm23518-201ENSMUST00000082835 153 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trim35Q8C006 AC160931.3-201ENSMUST00000222111 2267 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim35Q8C006 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim35Q8C006 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim35Q8C006 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim35Q8C006 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim35Q8C006 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm5248-201ENSMUST00000186108 4046 ntBASIC6.07□□□□□ -1.44
Trim35Q8C006 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim35Q8C006 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.06□□□□□ -1.44
Trim35Q8C006 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim35Q8C006 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Trim35Q8C006 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Trim35Q8C006 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm11902-201ENSMUST00000118849 270 ntBASIC6.06□□□□□ -1.44
Trim35Q8C006 n-R5s61-201ENSMUST00000122711 118 ntBASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm22770-201ENSMUST00000158368 67 ntBASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm27512-201ENSMUST00000175328 126 ntBASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm6009-201ENSMUST00000210848 280 ntBASIC6.06□□□□□ -1.44
Trim35Q8C006 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim35Q8C006 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 mt-Tl2-201ENSMUST00000082417 71 ntBASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm22738-201ENSMUST00000083440 147 ntBASIC6.06□□□□□ -1.44
Trim35Q8C006 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim35Q8C006 Gm21034-201ENSMUST00000207390 2608 ntBASIC6.06□□□□□ -1.44
Trim35Q8C006 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Trim35Q8C006 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim35Q8C006 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim35Q8C006 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm3956-201ENSMUST00000164882 2560 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim35Q8C006 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm14688-201ENSMUST00000119169 303 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm11786-201ENSMUST00000120799 155 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm17366-201ENSMUST00000167629 187 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm27653-201ENSMUST00000185037 136 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm4248-201ENSMUST00000196905 316 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm18000-201ENSMUST00000212153 800 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm8219-201ENSMUST00000218309 242 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 AC127371.3-201ENSMUST00000228129 415 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm22247-201ENSMUST00000082476 131 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Gm23509-201ENSMUST00000083080 160 ntBASIC6.05□□□□□ -1.44
Trim35Q8C006 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim35Q8C006 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim35Q8C006 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim35Q8C006 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.05□□□□□ -1.44
Trim35Q8C006 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim35Q8C006 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms