Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim28Q62318 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim28Q62318 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim28Q62318 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim28Q62318 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim28Q62318 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim28Q62318 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Trim28Q62318 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim28Q62318 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Mir466b-8-201ENSMUST00000103883 86 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Gm14811-201ENSMUST00000117070 117 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Gm12025-201ENSMUST00000117768 144 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
Trim28Q62318 Gm23118-201ENSMUST00000122657 187 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Trim28Q62318 Gm23326-201ENSMUST00000157419 105 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Mir466e-201ENSMUST00000198862 84 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Mir466c-1-201ENSMUST00000200654 84 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Gm42758-201ENSMUST00000202146 283 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Gm36776-201ENSMUST00000207006 203 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.62□□□□□ -1.67
Trim28Q62318 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Gm22572-201ENSMUST00000082985 105 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Gm24928-201ENSMUST00000083399 107 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Gm25897-201ENSMUST00000083709 107 ntBASIC4.62□□□□□ -1.67
Trim28Q62318 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim28Q62318 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Trim28Q62318 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim28Q62318 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.61□□□□□ -1.67
Trim28Q62318 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim28Q62318 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim28Q62318 Mir450-2-201ENSMUST00000102444 69 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Gm23530-201ENSMUST00000104564 137 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Gm7164-201ENSMUST00000117503 450 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Gm16100-201ENSMUST00000120489 231 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Gm21726-201ENSMUST00000179654 392 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
Trim28Q62318 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
Trim28Q62318 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Trim28Q62318 Gm28995-201ENSMUST00000186625 261 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Gm28069-201ENSMUST00000189926 214 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.61□□□□□ -1.67
Trim28Q62318 Gm44887-201ENSMUST00000208980 178 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Gm44853-201ENSMUST00000209070 250 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim28Q62318 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Trim28Q62318 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim28Q62318 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim28Q62318 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Trim28Q62318 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.61□□□□□ -1.67
Trim28Q62318 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim28Q62318 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim28Q62318 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim28Q62318 Gm12235-201ENSMUST00000118596 170 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm13082-201ENSMUST00000118877 561 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm11881-201ENSMUST00000119408 572 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm13356-201ENSMUST00000121678 335 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.6□□□□□ -1.67
Trim28Q62318 Gm25982-201ENSMUST00000157920 101 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm23545-201ENSMUST00000158205 104 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm25606-201ENSMUST00000158363 95 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Trim28Q62318 Gm32175-201ENSMUST00000193641 346 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.6□□□□□ -1.67
Trim28Q62318 Gm17990-201ENSMUST00000211728 553 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm18703-201ENSMUST00000215318 333 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.6□□□□□ -1.67
Trim28Q62318 AC161758.1-201ENSMUST00000226123 310 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim28Q62318 Gm23455-201ENSMUST00000083331 100 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm22739-201ENSMUST00000083437 160 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Olfr203-201ENSMUST00000089305 924 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trim28Q62318 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim28Q62318 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.6□□□□□ -1.67
Trim28Q62318 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim28Q62318 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim28Q62318 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Trim28Q62318 Gm14825-201ENSMUST00000113538 701 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm14681-201ENSMUST00000118047 411 ntBASIC4.59□□□□□ -1.67
Trim28Q62318 Gm13085-201ENSMUST00000118356 171 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms