Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trav6d-4Q5R1I0 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Trav6d-4Q5R1I0 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.62□□□□□ -2.15
Trav6d-4Q5R1I0 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trav6d-4Q5R1I0 Gm6215-201ENSMUST00000119297 1386 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm24715-201ENSMUST00000102377 95 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm20450-201ENSMUST00000173652 147 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm24813-201ENSMUST00000175310 84 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm6060-201ENSMUST00000188671 251 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm37989-201ENSMUST00000195202 803 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm43512-201ENSMUST00000198495 176 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm43550-201ENSMUST00000200597 303 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm6112-201ENSMUST00000208037 629 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm45772-201ENSMUST00000212961 240 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm18899-201ENSMUST00000217663 546 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 AC161758.2-201ENSMUST00000228513 218 ntBASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Trav6d-4Q5R1I0 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm36962-201ENSMUST00000192114 1761 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm23951-201ENSMUST00000104029 132 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm23109-201ENSMUST00000116867 126 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm22208-201ENSMUST00000122658 110 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm17538-201ENSMUST00000168236 327 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm24757-201ENSMUST00000176987 371 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm26701-201ENSMUST00000181571 234 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm27582-201ENSMUST00000184084 126 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm19280-201ENSMUST00000190191 205 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm28552-201ENSMUST00000190725 388 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm44818-201ENSMUST00000206608 358 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm20946-201ENSMUST00000212367 461 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
Trav6d-4Q5R1I0 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm15001-201ENSMUST00000117657 795 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm12137-201ENSMUST00000119565 346 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm13588-201ENSMUST00000120026 135 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm15488-201ENSMUST00000121682 670 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm23867-201ENSMUST00000122649 274 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm22073-201ENSMUST00000122668 189 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm1989-201ENSMUST00000126244 636 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm24478-201ENSMUST00000157439 158 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm22390-201ENSMUST00000157588 325 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm24177-201ENSMUST00000158927 131 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm25971-201ENSMUST00000158953 286 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Gm44727-201ENSMUST00000204225 451 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trav6d-4Q5R1I0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
Trav6d-4Q5R1I0 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.58□□□□□ -2.16
Trav6d-4Q5R1I0 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trav6d-4Q5R1I0 Gm26154-201ENSMUST00000102339 96 ntBASIC1.58□□□□□ -2.16
Trav6d-4Q5R1I0 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
Trav6d-4Q5R1I0 Gm11965-201ENSMUST00000122017 277 ntBASIC1.58□□□□□ -2.16
Trav6d-4Q5R1I0 Gm12238-201ENSMUST00000127764 124 ntBASIC1.58□□□□□ -2.16
Trav6d-4Q5R1I0 Gm26186-201ENSMUST00000157689 125 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms