Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm42451-201ENSMUST00000197410 244 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 Gm7041-201ENSMUST00000201227 524 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.35□□□□□ -1.71
Sox9Q04887 Gm45498-201ENSMUST00000210346 283 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 Gm6012-201ENSMUST00000210821 730 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox9Q04887 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Sox9Q04887 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Sox9Q04887 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Sox9Q04887 Neat1-201ENSMUST00000173672 20771 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.35□□□□□ -1.71
Sox9Q04887 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox9Q04887 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Sox9Q04887 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox9Q04887 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Sox9Q04887 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Sox9Q04887 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox9Q04887 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Sox9Q04887 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Sox9Q04887 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Sox9Q04887 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Sox9Q04887 Gm25943-201ENSMUST00000103791 90 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Mir466b-7-201ENSMUST00000103804 88 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Mir466b-5-201ENSMUST00000103900 88 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm24831-201ENSMUST00000116778 126 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm11576-201ENSMUST00000117433 417 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm14868-201ENSMUST00000117840 216 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm12760-201ENSMUST00000117861 482 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm11862-201ENSMUST00000119678 659 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm14578-201ENSMUST00000122166 391 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm23084-201ENSMUST00000157850 114 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm22840-201ENSMUST00000158444 136 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Mir466b-4-201ENSMUST00000178801 90 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm25285-201ENSMUST00000178951 90 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Mir466b-6-201ENSMUST00000180061 90 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Mir466c-2-201ENSMUST00000180211 90 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm37568-201ENSMUST00000191755 364 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm19252-201ENSMUST00000204705 305 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Sox9Q04887 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.34□□□□□ -1.71
Sox9Q04887 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm19326-201ENSMUST00000219818 326 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.34□□□□□ -1.71
Sox9Q04887 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox9Q04887 Gm10916-201ENSMUST00000080330 483 ntBASIC4.34□□□□□ -1.71
Sox9Q04887 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox9Q04887 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox9Q04887 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Sox9Q04887 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Sox9Q04887 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.34□□□□□ -1.72
Sox9Q04887 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Sox9Q04887 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Sox9Q04887 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Sox9Q04887 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sox9Q04887 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sox9Q04887 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sox9Q04887 Gm14823-201ENSMUST00000117698 238 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm14473-201ENSMUST00000122269 557 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sox9Q04887 Gm23540-201ENSMUST00000157543 164 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm22849-201ENSMUST00000157713 307 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm37601-201ENSMUST00000194922 394 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm44376-201ENSMUST00000197570 128 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC4.33□□□□□ -1.72
Sox9Q04887 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.33□□□□□ -1.72
Sox9Q04887 Gm44858-201ENSMUST00000207360 154 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm44959-201ENSMUST00000209127 231 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Gm24045-201ENSMUST00000083113 98 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sox9Q04887 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Sox9Q04887 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Sox9Q04887 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Sox9Q04887 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.33□□□□□ -1.72
Sox9Q04887 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.32□□□□□ -1.72
Sox9Q04887 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox9Q04887 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Sox9Q04887 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm22718-201ENSMUST00000122701 315 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm10059-201ENSMUST00000131139 171 ntBASIC4.32□□□□□ -1.72
Sox9Q04887 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.32□□□□□ -1.72
Sox9Q04887 Gm22561-201ENSMUST00000157331 84 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms