Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm24551-201ENSMUST00000158645 92 ntBASIC3.37□□□□□ -1.87
NcanP55066 Gm23025-201ENSMUST00000158769 111 ntBASIC3.37□□□□□ -1.87
NcanP55066 Gm17166-201ENSMUST00000172006 431 ntBASIC3.37□□□□□ -1.87
NcanP55066 Gm20651-201ENSMUST00000177219 329 ntBASIC3.37□□□□□ -1.87
NcanP55066 Gm28900-201ENSMUST00000185232 156 ntBASIC3.37□□□□□ -1.87
NcanP55066 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NcanP55066 Gm17771-201ENSMUST00000194477 1147 ntBASIC3.37□□□□□ -1.87
NcanP55066 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NcanP55066 Gm43245-201ENSMUST00000197603 468 ntBASIC3.37□□□□□ -1.87
NcanP55066 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NcanP55066 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NcanP55066 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.37□□□□□ -1.87
NcanP55066 Gm8423-201ENSMUST00000211387 607 ntBASIC3.37□□□□□ -1.87
NcanP55066 Gm18557-201ENSMUST00000218710 433 ntBASIC3.37□□□□□ -1.87
NcanP55066 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.37□□□□□ -1.87
NcanP55066 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.37□□□□□ -1.87
NcanP55066 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.37□□□□□ -1.87
NcanP55066 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.37□□□□□ -1.87
NcanP55066 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NcanP55066 Gm24622-201ENSMUST00000082619 162 ntBASIC3.37□□□□□ -1.87
NcanP55066 Gm22265-201ENSMUST00000082947 116 ntBASIC3.37□□□□□ -1.87
NcanP55066 Gm10343-201ENSMUST00000096279 348 ntBASIC3.37□□□□□ -1.87
NcanP55066 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NcanP55066 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NcanP55066 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
NcanP55066 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NcanP55066 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NcanP55066 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
NcanP55066 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.36□□□□□ -1.87
NcanP55066 Gm24951-201ENSMUST00000102182 109 ntBASIC3.36□□□□□ -1.87
NcanP55066 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.36□□□□□ -1.87
NcanP55066 Mir667-201ENSMUST00000102441 92 ntBASIC3.36□□□□□ -1.87
NcanP55066 Gm17132-201ENSMUST00000109542 1158 ntBASIC3.36□□□□□ -1.87
NcanP55066 Gm24274-201ENSMUST00000116787 124 ntBASIC3.36□□□□□ -1.87
NcanP55066 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.36□□□□□ -1.87
NcanP55066 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.36□□□□□ -1.87
NcanP55066 Gm26173-201ENSMUST00000158416 136 ntBASIC3.36□□□□□ -1.87
NcanP55066 Gm5527-201ENSMUST00000179821 642 ntBASIC3.36□□□□□ -1.87
NcanP55066 Mir6715-201ENSMUST00000184990 57 ntBASIC3.36□□□□□ -1.87
NcanP55066 Gm29600-201ENSMUST00000188687 377 ntBASIC3.36□□□□□ -1.87
NcanP55066 Gm29263-201ENSMUST00000188718 463 ntBASIC3.36□□□□□ -1.87
NcanP55066 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.36□□□□□ -1.87
NcanP55066 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.36□□□□□ -1.87
NcanP55066 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.36□□□□□ -1.87
NcanP55066 Gm43954-201ENSMUST00000204634 544 ntBASIC3.36□□□□□ -1.87
NcanP55066 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.36□□□□□ -1.87
NcanP55066 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.36□□□□□ -1.87
NcanP55066 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.36□□□□□ -1.87
NcanP55066 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NcanP55066 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NcanP55066 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.36□□□□□ -1.87
NcanP55066 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NcanP55066 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NcanP55066 Gm26396-201ENSMUST00000104093 132 ntBASIC3.35□□□□□ -1.87
NcanP55066 Mir883a-201ENSMUST00000104824 76 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.35□□□□□ -1.87
NcanP55066 Gm12393-201ENSMUST00000117084 848 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm14669-201ENSMUST00000118841 250 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm14119-201ENSMUST00000119511 235 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm13627-201ENSMUST00000119700 706 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm12044-201ENSMUST00000120335 213 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm13406-201ENSMUST00000121991 256 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.35□□□□□ -1.87
NcanP55066 Gm24922-201ENSMUST00000158511 102 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm20415-201ENSMUST00000172877 423 ntBASIC3.35□□□□□ -1.87
NcanP55066 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.35□□□□□ -1.87
NcanP55066 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.35□□□□□ -1.87
NcanP55066 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.35□□□□□ -1.87
NcanP55066 Gm17929-201ENSMUST00000186851 627 ntBASIC3.35□□□□□ -1.87
NcanP55066 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.35□□□□□ -1.87
NcanP55066 Gm37817-201ENSMUST00000195276 434 ntBASIC3.35□□□□□ -1.87
NcanP55066 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm45439-201ENSMUST00000211723 359 ntBASIC3.35□□□□□ -1.87
NcanP55066 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.35□□□□□ -1.87
NcanP55066 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.35□□□□□ -1.87
NcanP55066 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm8249-201ENSMUST00000219225 465 ntBASIC3.35□□□□□ -1.87
NcanP55066 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.35□□□□□ -1.87
NcanP55066 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm10242-201ENSMUST00000090064 330 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm23516-201ENSMUST00000093728 107 ntBASIC3.35□□□□□ -1.87
NcanP55066 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.35□□□□□ -1.87
NcanP55066 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
NcanP55066 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NcanP55066 Gm24430-201ENSMUST00000104077 104 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm26423-201ENSMUST00000104277 128 ntBASIC3.34□□□□□ -1.87
NcanP55066 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NcanP55066 Gm14843-201ENSMUST00000119596 212 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm22073-201ENSMUST00000122668 189 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm17030-201ENSMUST00000167016 393 ntBASIC3.34□□□□□ -1.87
NcanP55066 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.34□□□□□ -1.87
NcanP55066 Snord92-201ENSMUST00000175548 85 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm23648-201ENSMUST00000180301 107 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm29073-201ENSMUST00000185563 664 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm28141-201ENSMUST00000186676 342 ntBASIC3.34□□□□□ -1.87
NcanP55066 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.34□□□□□ -1.87
NcanP55066 Gm29165-201ENSMUST00000190655 664 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms