Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm34073-201ENSMUST00000195736 212 ntBASIC4.71□□□□□ -1.66
Sox1P53783 Gm18540-201ENSMUST00000204025 526 ntBASIC4.71□□□□□ -1.66
Sox1P53783 AC159885.1-201ENSMUST00000222221 199 ntBASIC4.71□□□□□ -1.66
Sox1P53783 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sox1P53783 Snord14e-201ENSMUST00000082857 90 ntBASIC4.71□□□□□ -1.66
Sox1P53783 Gm22154-201ENSMUST00000083844 131 ntBASIC4.71□□□□□ -1.66
Sox1P53783 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sox1P53783 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sox1P53783 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.71□□□□□ -1.66
Sox1P53783 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Sox1P53783 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sox1P53783 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sox1P53783 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Sox1P53783 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox1P53783 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox1P53783 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sox1P53783 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.7□□□□□ -1.66
Sox1P53783 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.7□□□□□ -1.66
Sox1P53783 Gm27723-201ENSMUST00000157398 63 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Gm25861-201ENSMUST00000158251 109 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Gm6214-201ENSMUST00000178845 541 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Gm16378-201ENSMUST00000179168 342 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Gm28534-201ENSMUST00000187744 676 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Stk-ps2-204ENSMUST00000187808 616 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.7□□□□□ -1.66
Sox1P53783 Gm44294-201ENSMUST00000205090 728 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Gm45403-201ENSMUST00000209453 276 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Gm23300-201ENSMUST00000082712 125 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sox1P53783 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox1P53783 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.7□□□□□ -1.66
Sox1P53783 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.7□□□□□ -1.66
Sox1P53783 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sox1P53783 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sox1P53783 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Sox1P53783 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Sox1P53783 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.69□□□□□ -1.66
Sox1P53783 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.69□□□□□ -1.66
Sox1P53783 Gm23318-201ENSMUST00000158000 108 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Gm22538-201ENSMUST00000158169 299 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Gm23350-201ENSMUST00000158429 103 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Gm23112-201ENSMUST00000158606 125 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Gm27928-201ENSMUST00000183747 256 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Gm45296-201ENSMUST00000209625 205 ntBASIC4.69□□□□□ -1.66
Sox1P53783 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Sox1P53783 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.69□□□□□ -1.66
Sox1P53783 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sox1P53783 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Sox1P53783 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Sox1P53783 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Sox1P53783 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox1P53783 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Sox1P53783 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.68□□□□□ -1.66
Sox1P53783 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Sox1P53783 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox1P53783 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Sox1P53783 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.68□□□□□ -1.66
Sox1P53783 Gm13329-201ENSMUST00000117063 265 ntBASIC4.68□□□□□ -1.66
Sox1P53783 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.68□□□□□ -1.66
Sox1P53783 Gm5958-201ENSMUST00000147698 297 ntBASIC4.68□□□□□ -1.66
Sox1P53783 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.68□□□□□ -1.66
Sox1P53783 Gm26041-201ENSMUST00000158148 108 ntBASIC4.68□□□□□ -1.66
Sox1P53783 Gm24931-201ENSMUST00000158324 107 ntBASIC4.68□□□□□ -1.66
Sox1P53783 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Sox1P53783 Gm27695-201ENSMUST00000184301 91 ntBASIC4.68□□□□□ -1.66
Sox1P53783 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.68□□□□□ -1.66
Sox1P53783 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.68□□□□□ -1.66
Sox1P53783 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.68□□□□□ -1.66
Sox1P53783 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.68□□□□□ -1.66
Sox1P53783 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Sox1P53783 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Sox1P53783 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms