Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm6947-201ENSMUST00000186254 78 ntBASIC4.06□□□□□ -1.76
Ercc3P49135 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.06□□□□□ -1.76
Ercc3P49135 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC4.06□□□□□ -1.76
Ercc3P49135 Gm31123-201ENSMUST00000192094 666 ntBASIC4.06□□□□□ -1.76
Ercc3P49135 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.06□□□□□ -1.76
Ercc3P49135 Gm7946-201ENSMUST00000203326 958 ntBASIC4.06□□□□□ -1.76
Ercc3P49135 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ercc3P49135 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC4.06□□□□□ -1.76
Ercc3P49135 Gm22810-201ENSMUST00000082741 158 ntBASIC4.06□□□□□ -1.76
Ercc3P49135 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ercc3P49135 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ercc3P49135 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ercc3P49135 Gm9157-201ENSMUST00000117673 225 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm14868-201ENSMUST00000117840 216 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm11784-201ENSMUST00000118568 474 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm25807-201ENSMUST00000122783 305 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm25294-201ENSMUST00000122791 104 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.05□□□□□ -1.76
Ercc3P49135 Gm25519-201ENSMUST00000158392 127 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Ercc3P49135 Gm23860-201ENSMUST00000179446 132 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Mir6338-201ENSMUST00000183389 109 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm27445-201ENSMUST00000184484 72 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm28591-201ENSMUST00000185259 183 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm37523-201ENSMUST00000194901 412 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm18384-201ENSMUST00000195974 808 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ercc3P49135 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.05□□□□□ -1.76
Ercc3P49135 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ercc3P49135 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.05□□□□□ -1.76
Ercc3P49135 Gm6842-201ENSMUST00000211361 390 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.05□□□□□ -1.76
Ercc3P49135 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ercc3P49135 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.05□□□□□ -1.76
Ercc3P49135 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ercc3P49135 Gm22739-201ENSMUST00000083437 160 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm10161-201ENSMUST00000091506 204 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Gm5670-201ENSMUST00000093546 372 ntBASIC4.05□□□□□ -1.76
Ercc3P49135 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.05□□□□□ -1.76
Ercc3P49135 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ercc3P49135 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Ercc3P49135 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ercc3P49135 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Gm3940-201ENSMUST00000105087 432 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm14657-201ENSMUST00000117461 302 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm15112-201ENSMUST00000120152 860 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm12770-201ENSMUST00000121734 462 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm22521-201ENSMUST00000158272 134 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Ercc3P49135 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Gm24713-201ENSMUST00000178850 107 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm25448-201ENSMUST00000180065 107 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-7-201ENSMUST00000180364 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm28030-201ENSMUST00000184987 138 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm28141-201ENSMUST00000186676 342 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm28597-201ENSMUST00000187664 666 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.04□□□□□ -1.76
Ercc3P49135 Gm6510-201ENSMUST00000195916 574 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-6-201ENSMUST00000196127 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-12-201ENSMUST00000197274 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-5-201ENSMUST00000197439 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-10-201ENSMUST00000197745 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-11-201ENSMUST00000197952 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-4-201ENSMUST00000198665 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-9-201ENSMUST00000200087 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Mir669a-8-201ENSMUST00000200268 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm43227-201ENSMUST00000202239 677 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm44824-201ENSMUST00000207021 229 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm45312-201ENSMUST00000210566 311 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.04□□□□□ -1.76
Ercc3P49135 Gm45814-201ENSMUST00000212646 775 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm46193-201ENSMUST00000219399 364 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 AC157654.1-201ENSMUST00000224130 820 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ercc3P49135 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ercc3P49135 Snord35b-201ENSMUST00000082833 87 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Gm24533-201ENSMUST00000083138 196 ntBASIC4.04□□□□□ -1.76
Ercc3P49135 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ercc3P49135 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ercc3P49135 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ercc3P49135 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ercc3P49135 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ercc3P49135 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Ercc3P49135 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ercc3P49135 Gm24376-201ENSMUST00000104399 127 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm15094-201ENSMUST00000118394 1131 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm14867-201ENSMUST00000120156 866 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm15142-201ENSMUST00000121013 856 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm14694-201ENSMUST00000121856 282 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm23671-201ENSMUST00000157472 103 ntBASIC4.03□□□□□ -1.76
Ercc3P49135 Gm6374-201ENSMUST00000159051 788 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms