Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37000-201ENSMUST00000193058 428 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.66□□□□□ -1.98
Col2a1P28481 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Col2a1P28481 Gm43669-201ENSMUST00000198229 436 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm42818-201ENSMUST00000198869 987 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm18861-201ENSMUST00000202509 1186 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.66□□□□□ -1.98
Col2a1P28481 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm35558-202ENSMUST00000221819 499 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 AC126690.1-201ENSMUST00000228898 397 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Col2a1P28481 Gm22806-201ENSMUST00000082738 136 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Col2a1P28481 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Col2a1P28481 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.66□□□□□ -1.98
Col2a1P28481 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
Col2a1P28481 Gm43662-201ENSMUST00000198310 2271 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm13728-201ENSMUST00000117471 400 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm13588-201ENSMUST00000120026 135 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm23792-201ENSMUST00000122557 93 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm22478-201ENSMUST00000122570 154 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC2.65□□□□□ -1.98
Col2a1P28481 Gm25979-201ENSMUST00000157177 138 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
Col2a1P28481 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Col2a1P28481 Gm20648-201ENSMUST00000175815 328 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm27608-201ENSMUST00000184822 162 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.65□□□□□ -1.98
Col2a1P28481 Gm38080-201ENSMUST00000194035 268 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.65□□□□□ -1.98
Col2a1P28481 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 AC107369.1-201ENSMUST00000227373 860 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Col2a1P28481 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Col2a1P28481 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Col2a1P28481 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Col2a1P28481 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Col2a1P28481 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.98
Col2a1P28481 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.65□□□□□ -1.98
Col2a1P28481 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.65□□□□□ -1.98
Col2a1P28481 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Col2a1P28481 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col2a1P28481 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Col2a1P28481 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col2a1P28481 Gm25938-201ENSMUST00000104139 166 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.65□□□□□ -1.99
Col2a1P28481 Gm25509-201ENSMUST00000116985 106 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm13731-201ENSMUST00000117332 196 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm25807-201ENSMUST00000122783 305 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm25113-201ENSMUST00000157185 143 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm24601-201ENSMUST00000157970 143 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm24053-201ENSMUST00000158620 105 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm2389-201ENSMUST00000160487 189 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col2a1P28481 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm26365-201ENSMUST00000179177 94 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col2a1P28481 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col2a1P28481 Gm37219-201ENSMUST00000192036 926 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm9632-201ENSMUST00000195934 643 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm43897-201ENSMUST00000204019 309 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Col2a1P28481 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Gm46389-201ENSMUST00000223199 392 ntBASIC2.65□□□□□ -1.99
Col2a1P28481 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Col2a1P28481 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Col2a1P28481 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col2a1P28481 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
Col2a1P28481 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Col2a1P28481 Gm5396-201ENSMUST00000121222 532 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.64□□□□□ -1.99
Col2a1P28481 Gm23599-201ENSMUST00000157261 251 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Gm17085-201ENSMUST00000165425 502 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Gm17030-201ENSMUST00000167016 393 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Gm25944-201ENSMUST00000178758 94 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Col2a1P28481 Gm19252-201ENSMUST00000204705 305 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Gm18268-201ENSMUST00000208445 943 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Gm46136-201ENSMUST00000214730 565 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.64□□□□□ -1.99
Col2a1P28481 AC162376.1-201ENSMUST00000220120 435 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col2a1P28481 Mir322-201ENSMUST00000083484 95 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Col2a1P28481 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.64□□□□□ -1.99
Col2a1P28481 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Col2a1P28481 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms