Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm19237-201ENSMUST00000205036 1132 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm44938-201ENSMUST00000208614 427 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col1a1P11087 Gm23347-201ENSMUST00000083823 82 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col1a1P11087 Gm24541-201ENSMUST00000103871 96 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm12513-201ENSMUST00000118617 352 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm12803-201ENSMUST00000118907 821 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm11582-201ENSMUST00000121041 236 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.07□□□□□ -2.08
Col1a1P11087 Gm6012-201ENSMUST00000210821 730 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm20304-201ENSMUST00000218168 444 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm46312-201ENSMUST00000220961 420 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm17872-201ENSMUST00000222550 532 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col1a1P11087 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col1a1P11087 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Col1a1P11087 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.07□□□□□ -2.08
Col1a1P11087 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm28404-201ENSMUST00000190242 453 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm37431-201ENSMUST00000195102 111 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Col1a1P11087 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.07□□□□□ -2.08
Col1a1P11087 Gm45445-201ENSMUST00000209586 232 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm20039-201ENSMUST00000210329 394 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 CT030662.3-201ENSMUST00000228751 476 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Col1a1P11087 Gm5471-201ENSMUST00000072732 337 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Col1a1P11087 Gm25402-201ENSMUST00000082966 131 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.07□□□□□ -2.08
Col1a1P11087 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col1a1P11087 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Col1a1P11087 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col1a1P11087 Gm14885-201ENSMUST00000117969 496 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Gm15951-201ENSMUST00000118377 400 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Gm25279-201ENSMUST00000122608 133 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Gm17161-201ENSMUST00000169187 524 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Col1a1P11087 Gm29597-201ENSMUST00000188035 308 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Col1a1P11087 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Col1a1P11087 AC129323.1-201ENSMUST00000216733 470 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Gm7984-201ENSMUST00000060640 538 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Gm5670-201ENSMUST00000093546 372 ntBASIC2.06□□□□□ -2.08
Col1a1P11087 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Col1a1P11087 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col1a1P11087 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Col1a1P11087 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col1a1P11087 Gm25496-201ENSMUST00000104430 120 ntBASIC2.05□□□□□ -2.08
Col1a1P11087 Gm22107-201ENSMUST00000122548 100 ntBASIC2.05□□□□□ -2.08
Col1a1P11087 Gm24902-201ENSMUST00000158126 123 ntBASIC2.05□□□□□ -2.08
Col1a1P11087 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Col1a1P11087 Gm27894-201ENSMUST00000184177 92 ntBASIC2.05□□□□□ -2.08
Col1a1P11087 Gm18727-201ENSMUST00000185981 553 ntBASIC2.05□□□□□ -2.08
Col1a1P11087 Gm29604-201ENSMUST00000187176 163 ntBASIC2.05□□□□□ -2.08
Col1a1P11087 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.05□□□□□ -2.08
Col1a1P11087 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.05□□□□□ -2.08
Col1a1P11087 Gm46993-201ENSMUST00000220708 259 ntBASIC2.05□□□□□ -2.08
Col1a1P11087 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC2.05□□□□□ -2.08
Col1a1P11087 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Col1a1P11087 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Col1a1P11087 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col1a1P11087 Gm15896-201ENSMUST00000118045 440 ntBASIC2.04□□□□□ -2.08
Col1a1P11087 Gm12926-201ENSMUST00000121158 409 ntBASIC2.04□□□□□ -2.08
Col1a1P11087 Gm11438-201ENSMUST00000121582 189 ntBASIC2.04□□□□□ -2.08
Col1a1P11087 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.04□□□□□ -2.08
Col1a1P11087 Gm27668-201ENSMUST00000184188 120 ntBASIC2.04□□□□□ -2.08
Col1a1P11087 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.04□□□□□ -2.08
Col1a1P11087 Gm22897-201ENSMUST00000197860 128 ntBASIC2.04□□□□□ -2.08
Col1a1P11087 Gm43954-201ENSMUST00000204634 544 ntBASIC2.04□□□□□ -2.08
Col1a1P11087 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC2.04□□□□□ -2.08
Col1a1P11087 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.04□□□□□ -2.08
Col1a1P11087 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.04□□□□□ -2.08
Col1a1P11087 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Col1a1P11087 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Col1a1P11087 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col1a1P11087 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col1a1P11087 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col1a1P11087 Gm25170-201ENSMUST00000104191 129 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm13614-201ENSMUST00000117306 503 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm11577-201ENSMUST00000118030 737 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm12401-201ENSMUST00000118435 228 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col1a1P11087 Gm26406-201ENSMUST00000158503 124 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Mir3968-201ENSMUST00000175355 100 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm19123-201ENSMUST00000190716 651 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm43911-201ENSMUST00000203097 76 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm44555-201ENSMUST00000209008 148 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Gm9628-201ENSMUST00000222169 725 ntBASIC2.03□□□□□ -2.08
Col1a1P11087 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms