Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm23515-201ENSMUST00000082829 107 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm23518-201ENSMUST00000082835 153 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Mir370-201ENSMUST00000083499 79 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm4017-201ENSMUST00000084813 338 ntBASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Ushbp1Q8R370 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm24835-201ENSMUST00000116777 111 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm12982-201ENSMUST00000117408 190 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm14049-201ENSMUST00000121009 636 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm11645-201ENSMUST00000121589 649 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm26148-201ENSMUST00000157430 68 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm16303-201ENSMUST00000161498 390 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm17119-201ENSMUST00000163943 280 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm10067-201ENSMUST00000179462 348 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm7909-201ENSMUST00000182688 614 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm27580-201ENSMUST00000183666 149 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm29452-201ENSMUST00000187996 313 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm28860-201ENSMUST00000188103 313 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm28314-201ENSMUST00000191276 345 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm44011-201ENSMUST00000203336 394 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm6929-201ENSMUST00000210930 468 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Gm25853-201ENSMUST00000082793 132 ntBASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Ushbp1Q8R370 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm4736-201ENSMUST00000100870 380 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm11566-201ENSMUST00000118550 203 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm15377-201ENSMUST00000119594 246 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm11718-201ENSMUST00000119942 537 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm14687-201ENSMUST00000120206 363 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm14649-201ENSMUST00000121814 324 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm14804-201ENSMUST00000122322 508 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm25781-201ENSMUST00000122527 84 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm16327-201ENSMUST00000137146 228 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm22036-201ENSMUST00000157279 215 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm23231-201ENSMUST00000157299 104 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm22101-201ENSMUST00000157928 103 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm22889-201ENSMUST00000158639 58 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm24737-201ENSMUST00000158861 100 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm7241-201ENSMUST00000159853 357 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm24100-201ENSMUST00000178592 79 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm24137-201ENSMUST00000180055 79 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm22391-201ENSMUST00000180356 79 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm28623-201ENSMUST00000187219 192 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm37692-201ENSMUST00000192633 232 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm35876-201ENSMUST00000205044 459 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm2436-201ENSMUST00000219562 774 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Mir30e-201ENSMUST00000083475 92 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm22365-201ENSMUST00000093750 117 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Ushbp1Q8R370 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
Ushbp1Q8R370 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Ushbp1Q8R370 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.33□□□□□ -1.72
Ushbp1Q8R370 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ushbp1Q8R370 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms