Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm13717-201ENSMUST00000119868 365 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm12897-201ENSMUST00000120341 250 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim28Q62318 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim28Q62318 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim28Q62318 Gm22911-201ENSMUST00000177920 107 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm8532-201ENSMUST00000179174 461 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm29320-201ENSMUST00000185235 615 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm29179-202ENSMUST00000186138 615 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm29448-201ENSMUST00000186675 615 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm29314-201ENSMUST00000186800 615 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm29045-201ENSMUST00000187278 698 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm28253-202ENSMUST00000187971 615 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm29169-201ENSMUST00000189835 615 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm43070-201ENSMUST00000196938 415 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm45031-201ENSMUST00000206800 288 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.65□□□□□ -1.67
Trim28Q62318 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trim28Q62318 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm25800-201ENSMUST00000082636 134 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm23096-201ENSMUST00000083447 107 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Olfr575-201ENSMUST00000084812 957 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim28Q62318 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Trim28Q62318 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.65□□□□□ -1.67
Trim28Q62318 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Trim28Q62318 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
Trim28Q62318 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim28Q62318 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Trim28Q62318 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim28Q62318 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim28Q62318 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim28Q62318 Gm15101-201ENSMUST00000178818 1502 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm23691-201ENSMUST00000101878 107 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Trim28Q62318 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm13228-201ENSMUST00000118937 634 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm13475-201ENSMUST00000119290 234 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.64□□□□□ -1.67
Trim28Q62318 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.64□□□□□ -1.67
Trim28Q62318 Gm25334-201ENSMUST00000158036 110 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm5527-201ENSMUST00000179821 642 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm27676-201ENSMUST00000183669 61 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm28591-201ENSMUST00000185259 183 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC4.64□□□□□ -1.67
Trim28Q62318 Gm43651-201ENSMUST00000199796 439 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm45409-201ENSMUST00000211486 252 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm45742-201ENSMUST00000212400 433 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm29884-201ENSMUST00000218403 453 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm23627-201ENSMUST00000082459 107 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm22502-201ENSMUST00000082488 107 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm24149-201ENSMUST00000082757 107 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Gm24764-201ENSMUST00000083686 199 ntBASIC4.64□□□□□ -1.67
Trim28Q62318 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Trim28Q62318 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Trim28Q62318 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Trim28Q62318 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Trim28Q62318 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim28Q62318 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Trim28Q62318 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Trim28Q62318 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Trim28Q62318 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim28Q62318 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim28Q62318 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim28Q62318 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Trim28Q62318 Gm16431-201ENSMUST00000117454 431 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Gm15180-201ENSMUST00000117745 492 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Gm14761-201ENSMUST00000121363 262 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.63□□□□□ -1.67
Trim28Q62318 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.63□□□□□ -1.67
Trim28Q62318 Gm23124-201ENSMUST00000157650 107 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Gm24419-201ENSMUST00000157875 332 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Gm22839-201ENSMUST00000158436 304 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Gm25243-201ENSMUST00000174912 207 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim28Q62318 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim28Q62318 Gm25314-201ENSMUST00000178810 79 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Gm37658-201ENSMUST00000192672 315 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 AC154271.1-201ENSMUST00000224780 383 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim28Q62318 Gm22365-201ENSMUST00000093750 117 ntBASIC4.63□□□□□ -1.67
Trim28Q62318 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim28Q62318 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Trim28Q62318 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim28Q62318 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim28Q62318 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Trim28Q62318 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Trim28Q62318 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms