Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Six4Q61321 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Six4Q61321 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.56□□□□□ -2
Six4Q61321 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.56□□□□□ -2
Six4Q61321 Gm6030-201ENSMUST00000078768 402 ntBASIC2.56□□□□□ -2
Six4Q61321 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.56□□□□□ -2
Six4Q61321 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm22658-201ENSMUST00000104196 155 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm14677-201ENSMUST00000117866 486 ntBASIC2.55□□□□□ -2
Six4Q61321 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.55□□□□□ -2
Six4Q61321 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm11456-201ENSMUST00000121070 256 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.55□□□□□ -2
Six4Q61321 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six4Q61321 Gm23391-201ENSMUST00000157579 104 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm24960-201ENSMUST00000157923 90 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm26406-201ENSMUST00000158503 124 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm16289-201ENSMUST00000162079 183 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm16232-201ENSMUST00000162856 167 ntBASIC2.55□□□□□ -2
Six4Q61321 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six4Q61321 Gm3104-201ENSMUST00000171004 473 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm20450-201ENSMUST00000173652 147 ntBASIC2.55□□□□□ -2
Six4Q61321 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.55□□□□□ -2
Six4Q61321 Gm24757-201ENSMUST00000176987 371 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm22776-201ENSMUST00000178634 94 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six4Q61321 Gm23767-201ENSMUST00000179278 94 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six4Q61321 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.55□□□□□ -2
Six4Q61321 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.55□□□□□ -2
Six4Q61321 Mir6363-201ENSMUST00000184880 114 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.55□□□□□ -2
Six4Q61321 Gm42578-201ENSMUST00000199960 194 ntBASIC2.55□□□□□ -2
Six4Q61321 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Six4Q61321 Gm44903-201ENSMUST00000206840 130 ntBASIC2.55□□□□□ -2
Six4Q61321 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Six4Q61321 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.55□□□□□ -2
Six4Q61321 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six4Q61321 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Six4Q61321 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.55□□□□□ -2
Six4Q61321 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.55□□□□□ -2
Six4Q61321 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.55□□□□□ -2
Six4Q61321 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Six4Q61321 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
Six4Q61321 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.55□□□□□ -2
Six4Q61321 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.54□□□□□ -2
Six4Q61321 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.54□□□□□ -2
Six4Q61321 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
Six4Q61321 Gm26473-201ENSMUST00000116763 127 ntBASIC2.54□□□□□ -2
Six4Q61321 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm14940-201ENSMUST00000119309 495 ntBASIC2.54□□□□□ -2
Six4Q61321 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm25808-201ENSMUST00000122784 284 ntBASIC2.54□□□□□ -2
Six4Q61321 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.54□□□□□ -2
Six4Q61321 Gm16533-201ENSMUST00000140035 228 ntBASIC2.54□□□□□ -2
Six4Q61321 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.54□□□□□ -2
Six4Q61321 Gm3025-201ENSMUST00000163454 489 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm2878-201ENSMUST00000170173 486 ntBASIC2.54□□□□□ -2
Six4Q61321 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
Six4Q61321 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.54□□□□□ -2
Six4Q61321 Mir7013-201ENSMUST00000183540 72 ntBASIC2.54□□□□□ -2
Six4Q61321 Mir6386-201ENSMUST00000183558 104 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm27527-201ENSMUST00000183903 99 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm27582-201ENSMUST00000184084 126 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm20776-201ENSMUST00000189940 700 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm37576-201ENSMUST00000194228 372 ntBASIC2.54□□□□□ -2
Six4Q61321 Gm44161-201ENSMUST00000203532 253 ntBASIC2.54□□□□□ -2
Six4Q61321 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Six4Q61321 Gm18645-201ENSMUST00000209593 651 ntBASIC2.54□□□□□ -2
Six4Q61321 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.54□□□□□ -2
Six4Q61321 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.54□□□□□ -2
Six4Q61321 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.54□□□□□ -2
Six4Q61321 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Six4Q61321 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Six4Q61321 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.53□□□□□ -2
Six4Q61321 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.53□□□□□ -2
Six4Q61321 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Six4Q61321 Mir542-201ENSMUST00000102186 85 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm26341-201ENSMUST00000104561 134 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm15159-201ENSMUST00000117062 764 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm15986-201ENSMUST00000122153 400 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm12368-201ENSMUST00000122251 434 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.53□□□□□ -2
Six4Q61321 Gm24532-201ENSMUST00000157951 286 ntBASIC2.53□□□□□ -2
Six4Q61321 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Six4Q61321 Mir3076-201ENSMUST00000175415 60 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm27522-201ENSMUST00000183949 230 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm37708-201ENSMUST00000192337 895 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.53□□□□□ -2
Six4Q61321 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.53□□□□□ -2
Six4Q61321 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.53□□□□□ -2
Six4Q61321 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC2.53□□□□□ -2
Six4Q61321 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.53□□□□□ -2
Six4Q61321 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Six4Q61321 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.53□□□□□ -2.01
Six4Q61321 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
Six4Q61321 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.52□□□□□ -2.01
Six4Q61321 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.52□□□□□ -2.01
Six4Q61321 Mir344c-201ENSMUST00000103919 92 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms