Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm23852-201ENSMUST00000158376 77 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm25369-201ENSMUST00000158848 132 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm25999-201ENSMUST00000175398 133 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm26092-201ENSMUST00000179798 97 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Mir669a-1-201ENSMUST00000180238 97 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm11392-201ENSMUST00000181419 710 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm28700-201ENSMUST00000187614 579 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm28414-201ENSMUST00000190111 294 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm43604-201ENSMUST00000199799 705 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm45049-201ENSMUST00000207586 591 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm17991-201ENSMUST00000208139 297 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm5373-201ENSMUST00000212113 1050 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm3829-201ENSMUST00000222362 619 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Gm38286-201ENSMUST00000195128 3105 ntBASIC2.88□□□□□ -1.95
Nkx2-1P50220 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Nkx2-1P50220 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nkx2-1P50220 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Mir467g-201ENSMUST00000116906 120 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm15613-201ENSMUST00000118396 326 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm14292-201ENSMUST00000118761 456 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm13482-201ENSMUST00000119842 254 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm14815-201ENSMUST00000120060 488 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm14982-201ENSMUST00000121102 442 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm16428-201ENSMUST00000121193 723 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm25365-201ENSMUST00000158852 121 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm10357-201ENSMUST00000159886 264 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Mir5136-201ENSMUST00000175573 76 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm23568-201ENSMUST00000177960 92 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm24829-201ENSMUST00000179245 92 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Mir7676-1-201ENSMUST00000183491 62 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Mir7676-2-201ENSMUST00000183523 62 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm27905-201ENSMUST00000184005 207 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm37343-201ENSMUST00000192542 111 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm44295-201ENSMUST00000203805 437 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm45814-201ENSMUST00000212646 775 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 AC132315.1-201ENSMUST00000221771 390 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 AC125379.1-201ENSMUST00000221928 111 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm7984-201ENSMUST00000060640 538 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.87□□□□□ -1.95
Nkx2-1P50220 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Nkx2-1P50220 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm37777-201ENSMUST00000195546 3366 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx2-1P50220 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm25765-201ENSMUST00000104100 132 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm12125-201ENSMUST00000117261 736 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm5757-201ENSMUST00000117494 528 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm14172-201ENSMUST00000118255 644 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Gm12803-201ENSMUST00000118907 821 ntBASIC2.86□□□□□ -1.95
Nkx2-1P50220 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms