Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cdx1P18111 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Cdx1P18111 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cdx1P18111 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cdx1P18111 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cdx1P18111 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Cdx1P18111 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Cdx1P18111 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm22486-201ENSMUST00000116815 137 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm15159-201ENSMUST00000117062 764 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm11268-201ENSMUST00000118347 267 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm13443-201ENSMUST00000120770 555 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm11430-201ENSMUST00000121317 217 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm14101-201ENSMUST00000121502 473 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm26027-201ENSMUST00000122725 268 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm12238-201ENSMUST00000127764 124 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm2830-201ENSMUST00000140330 385 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.43□□□□□ -2.02
Cdx1P18111 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm26186-201ENSMUST00000157689 125 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm24080-201ENSMUST00000175178 232 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm22910-201ENSMUST00000178568 132 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm26585-201ENSMUST00000180890 630 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm27783-201ENSMUST00000183534 105 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm29641-201ENSMUST00000188955 259 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm29516-201ENSMUST00000190402 468 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm37213-201ENSMUST00000193077 586 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.43□□□□□ -2.02
Cdx1P18111 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm45860-201ENSMUST00000212700 334 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 AC124746.2-201ENSMUST00000226594 427 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.43□□□□□ -2.02
Cdx1P18111 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Cdx1P18111 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.43□□□□□ -2.02
Cdx1P18111 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Cdx1P18111 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cdx1P18111 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.42□□□□□ -2.02
Cdx1P18111 Gm6265-201ENSMUST00000149263 231 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cdx1P18111 Mir6917-201ENSMUST00000184111 61 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Gm28169-201ENSMUST00000190342 345 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.42□□□□□ -2.02
Cdx1P18111 Gm43227-201ENSMUST00000202239 677 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Gm29920-201ENSMUST00000206876 754 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.42□□□□□ -2.02
Cdx1P18111 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Cdx1P18111 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cdx1P18111 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cdx1P18111 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Cdx1P18111 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cdx1P18111 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Cdx1P18111 Gm26341-201ENSMUST00000104561 134 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm14987-201ENSMUST00000117820 676 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm12156-201ENSMUST00000119188 554 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm15113-201ENSMUST00000119280 836 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm15106-201ENSMUST00000119691 821 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm14240-201ENSMUST00000120353 546 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm12617-201ENSMUST00000121268 381 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm14363-201ENSMUST00000122304 409 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm23704-201ENSMUST00000158844 340 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Cdx1P18111 Gm27330-201ENSMUST00000184689 132 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm21489-201ENSMUST00000189668 818 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm29184-201ENSMUST00000190038 334 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm37037-201ENSMUST00000194475 424 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm43930-201ENSMUST00000203868 845 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm45400-201ENSMUST00000211603 653 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Cdx1P18111 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm9845-201ENSMUST00000056409 598 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Cdx1P18111 Snord104-201ENSMUST00000083192 70 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Cdx1P18111 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cdx1P18111 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.41□□□□□ -2.02
Cdx1P18111 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Cdx1P18111 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.41□□□□□ -2.02
Cdx1P18111 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms