Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm25888-201ENSMUST00000157778 302 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.14□□□□□ -2.07
Col1a1P11087 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col1a1P11087 Gm22716-201ENSMUST00000177596 107 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col1a1P11087 Trbv22-201ENSMUST00000191697 291 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm36994-201ENSMUST00000192941 492 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.14□□□□□ -2.07
Col1a1P11087 Gm44881-201ENSMUST00000205425 367 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm44607-201ENSMUST00000205611 1090 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC2.14□□□□□ -2.07
Col1a1P11087 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Gm7530-201ENSMUST00000218466 605 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Col1a1P11087 Mir129-2-201ENSMUST00000083577 90 ntBASIC2.14□□□□□ -2.07
Col1a1P11087 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col1a1P11087 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col1a1P11087 Gm14253-201ENSMUST00000122112 639 ntBASIC2.13□□□□□ -2.07
Col1a1P11087 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC2.13□□□□□ -2.07
Col1a1P11087 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.13□□□□□ -2.07
Col1a1P11087 Gm5309-201ENSMUST00000197416 677 ntBASIC2.13□□□□□ -2.07
Col1a1P11087 Gm43550-201ENSMUST00000200597 303 ntBASIC2.13□□□□□ -2.07
Col1a1P11087 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.13□□□□□ -2.07
Col1a1P11087 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Col1a1P11087 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.13□□□□□ -2.07
Col1a1P11087 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.13□□□□□ -2.07
Col1a1P11087 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.12□□□□□ -2.07
Col1a1P11087 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col1a1P11087 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Col1a1P11087 Gm25090-201ENSMUST00000104000 132 ntBASIC2.12□□□□□ -2.07
Col1a1P11087 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Col1a1P11087 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.12□□□□□ -2.07
Col1a1P11087 Gm18341-201ENSMUST00000197538 622 ntBASIC2.12□□□□□ -2.07
Col1a1P11087 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.12□□□□□ -2.07
Col1a1P11087 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Col1a1P11087 Gm5322-201ENSMUST00000206142 699 ntBASIC2.12□□□□□ -2.07
Col1a1P11087 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.12□□□□□ -2.07
Col1a1P11087 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.12□□□□□ -2.07
Col1a1P11087 Gm24919-201ENSMUST00000083020 106 ntBASIC2.12□□□□□ -2.07
Col1a1P11087 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.12□□□□□ -2.07
Col1a1P11087 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col1a1P11087 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col1a1P11087 Gm25274-201ENSMUST00000104296 135 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Gm22072-201ENSMUST00000116850 121 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Gm13913-201ENSMUST00000121126 260 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Col1a1P11087 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Gm23470-201ENSMUST00000157129 120 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Gm25044-201ENSMUST00000158603 104 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.11□□□□□ -2.07
Col1a1P11087 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col1a1P11087 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.11□□□□□ -2.07
Col1a1P11087 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col1a1P11087 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Olfr1285-201ENSMUST00000208523 903 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.11□□□□□ -2.07
Col1a1P11087 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.11□□□□□ -2.07
Col1a1P11087 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Col1a1P11087 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Col1a1P11087 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Col1a1P11087 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Col1a1P11087 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Gm13487-201ENSMUST00000122240 864 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Gm25555-201ENSMUST00000158078 111 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Gm20526-201ENSMUST00000173416 158 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Gm27326-201ENSMUST00000183504 95 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.1□□□□□ -2.07
Col1a1P11087 Gm44849-201ENSMUST00000207595 484 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Gm45522-201ENSMUST00000210784 166 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Gm29884-201ENSMUST00000218403 453 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.1□□□□□ -2.07
Col1a1P11087 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col1a1P11087 Gm25831-201ENSMUST00000158924 163 ntBASIC2.09□□□□□ -2.07
Col1a1P11087 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.09□□□□□ -2.07
Col1a1P11087 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col1a1P11087 Gm45034-201ENSMUST00000206831 482 ntBASIC2.09□□□□□ -2.07
Col1a1P11087 Gm19599-201ENSMUST00000218898 358 ntBASIC2.09□□□□□ -2.07
Col1a1P11087 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col1a1P11087 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Col1a1P11087 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Col1a1P11087 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Col1a1P11087 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.09□□□□□ -2.08
Col1a1P11087 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col1a1P11087 Snord65-201ENSMUST00000104269 72 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Col1a1P11087 Gm13574-201ENSMUST00000120482 394 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm3102-201ENSMUST00000164236 489 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm2878-201ENSMUST00000170173 486 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm9613-201ENSMUST00000171662 196 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm27155-201ENSMUST00000183716 898 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm37455-201ENSMUST00000191993 529 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm18433-201ENSMUST00000192747 197 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Gm3010-201ENSMUST00000198805 448 ntBASIC2.08□□□□□ -2.08
Col1a1P11087 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms