Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm17186-201ENSMUST00000171742 456 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm20397-201ENSMUST00000174520 362 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm10784-201ENSMUST00000178715 238 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm27761-201ENSMUST00000184091 131 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm29596-201ENSMUST00000185710 385 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm29603-201ENSMUST00000186792 334 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.14□□□□□ -1.75
Hoxd3P09027 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm37421-201ENSMUST00000193088 132 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm44456-201ENSMUST00000196554 89 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Mir409-201ENSMUST00000198153 79 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm43746-201ENSMUST00000200028 317 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm8942-201ENSMUST00000217892 400 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm19256-201ENSMUST00000218550 231 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm6049-201ENSMUST00000222369 458 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.14□□□□□ -1.75
Hoxd3P09027 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hoxd3P09027 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm9174-201ENSMUST00000078149 255 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm26495-201ENSMUST00000083152 137 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Hoxd3P09027 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.14□□□□□ -1.75
Hoxd3P09027 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Hoxd3P09027 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Hoxd3P09027 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd3P09027 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd3P09027 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd3P09027 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm11334-201ENSMUST00000121969 156 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm23782-201ENSMUST00000157939 120 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Scarna6-201ENSMUST00000158656 265 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm5258-201ENSMUST00000165437 327 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Mir6343-201ENSMUST00000183584 84 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm27355-201ENSMUST00000185045 128 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm29574-201ENSMUST00000186226 696 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm29813-201ENSMUST00000195856 447 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm29704-201ENSMUST00000196011 253 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm42542-201ENSMUST00000197978 268 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm44463-201ENSMUST00000198895 137 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm43955-201ENSMUST00000204332 142 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd3P09027 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm23508-201ENSMUST00000083079 72 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm25139-201ENSMUST00000083247 210 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.13□□□□□ -1.75
Hoxd3P09027 Gm21940-201ENSMUST00000204940 2278 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Hoxd3P09027 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm24429-201ENSMUST00000104076 132 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm14512-201ENSMUST00000117924 230 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm12808-201ENSMUST00000120597 404 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm14551-201ENSMUST00000120802 256 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm11645-201ENSMUST00000121589 649 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm25020-201ENSMUST00000178071 107 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm24799-201ENSMUST00000178431 79 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC4.12□□□□□ -1.75
Hoxd3P09027 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.12□□□□□ -1.75
Hoxd3P09027 Gm44330-201ENSMUST00000200106 143 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms